Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Usp35M0QWN7 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp35M0QWN7 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp35M0QWN7 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp35M0QWN7 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp35M0QWN7 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp35M0QWN7 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Usp35M0QWN7 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp35M0QWN7 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp35M0QWN7 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.13□□□□□ -0.15
Usp35M0QWN7 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp35M0QWN7 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp35M0QWN7 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Usp35M0QWN7 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Usp35M0QWN7 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp35M0QWN7 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Usp35M0QWN7 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Usp35M0QWN7 Gm10305-201ENSMUST00000195331 2475 ntBASIC14.13□□□□□ -0.15
Usp35M0QWN7 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Usp35M0QWN7 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Usp35M0QWN7 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Usp35M0QWN7 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp35M0QWN7 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC14.12□□□□□ -0.15
Usp35M0QWN7 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Usp35M0QWN7 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp35M0QWN7 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Usp35M0QWN7 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp35M0QWN7 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp35M0QWN7 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp35M0QWN7 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp35M0QWN7 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Usp35M0QWN7 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp35M0QWN7 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp35M0QWN7 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Usp35M0QWN7 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp35M0QWN7 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp35M0QWN7 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp35M0QWN7 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Usp35M0QWN7 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp35M0QWN7 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp35M0QWN7 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Usp35M0QWN7 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp35M0QWN7 Gm15770-201ENSMUST00000117498 584 ntBASIC14.12□□□□□ -0.15
Usp35M0QWN7 Gm12384-201ENSMUST00000119228 919 ntBASIC14.12□□□□□ -0.15
Usp35M0QWN7 Gm11803-201ENSMUST00000119966 444 ntBASIC14.12□□□□□ -0.15
Usp35M0QWN7 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC14.12□□□□□ -0.15
Usp35M0QWN7 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC14.12□□□□□ -0.15
Usp35M0QWN7 Gm22331-201ENSMUST00000158066 136 ntBASIC14.12□□□□□ -0.15
Usp35M0QWN7 Gm42693-201ENSMUST00000196779 631 ntBASIC14.12□□□□□ -0.15
Usp35M0QWN7 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC14.12□□□□□ -0.15
Usp35M0QWN7 Gm8598-201ENSMUST00000221184 836 ntBASIC14.12□□□□□ -0.15
Usp35M0QWN7 AC126253.1-201ENSMUST00000227974 824 ntBASIC14.12□□□□□ -0.15
Usp35M0QWN7 AC131997.1-201ENSMUST00000228611 1229 ntBASIC14.12□□□□□ -0.15
Usp35M0QWN7 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp35M0QWN7 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp35M0QWN7 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp35M0QWN7 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC14.12□□□□□ -0.15
Usp35M0QWN7 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp35M0QWN7 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp35M0QWN7 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp35M0QWN7 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp35M0QWN7 Gm7899-201ENSMUST00000192935 1897 ntBASIC14.12□□□□□ -0.15
Usp35M0QWN7 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Usp35M0QWN7 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Usp35M0QWN7 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp35M0QWN7 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp35M0QWN7 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp35M0QWN7 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp35M0QWN7 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Usp35M0QWN7 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC14.11□□□□□ -0.15
Usp35M0QWN7 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp35M0QWN7 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp35M0QWN7 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp35M0QWN7 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp35M0QWN7 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp35M0QWN7 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp35M0QWN7 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Usp35M0QWN7 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Usp35M0QWN7 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC14.11□□□□□ -0.15
Usp35M0QWN7 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
Usp35M0QWN7 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Usp35M0QWN7 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC14.11□□□□□ -0.15
Usp35M0QWN7 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC14.11□□□□□ -0.15
Usp35M0QWN7 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Usp35M0QWN7 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Usp35M0QWN7 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Usp35M0QWN7 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC14.11□□□□□ -0.15
Usp35M0QWN7 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC14.11□□□□□ -0.15
Usp35M0QWN7 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC14.11□□□□□ -0.15
Usp35M0QWN7 Gm43818-201ENSMUST00000200605 466 ntBASIC14.11□□□□□ -0.15
Usp35M0QWN7 Gm40466-201ENSMUST00000212174 422 ntBASIC14.11□□□□□ -0.15
Usp35M0QWN7 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.11□□□□□ -0.15
Usp35M0QWN7 Gm17330-201ENSMUST00000221047 165 ntBASIC14.11□□□□□ -0.15
Usp35M0QWN7 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Usp35M0QWN7 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp35M0QWN7 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp35M0QWN7 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp35M0QWN7 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Usp35M0QWN7 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp35M0QWN7 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms