Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
B020004C17RikJ3QP07 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
B020004C17RikJ3QP07 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
B020004C17RikJ3QP07 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
B020004C17RikJ3QP07 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
B020004C17RikJ3QP07 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
B020004C17RikJ3QP07 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
B020004C17RikJ3QP07 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
B020004C17RikJ3QP07 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
B020004C17RikJ3QP07 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
B020004C17RikJ3QP07 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
B020004C17RikJ3QP07 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
B020004C17RikJ3QP07 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
B020004C17RikJ3QP07 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
B020004C17RikJ3QP07 Gm23200-201ENSMUST00000104379 132 ntBASIC14.57□□□□□ -0.08
B020004C17RikJ3QP07 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC14.57□□□□□ -0.08
B020004C17RikJ3QP07 Gm22334-201ENSMUST00000158070 133 ntBASIC14.57□□□□□ -0.08
B020004C17RikJ3QP07 Gm16296-201ENSMUST00000159905 325 ntBASIC14.57□□□□□ -0.08
B020004C17RikJ3QP07 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
B020004C17RikJ3QP07 Gm8959-201ENSMUST00000213150 571 ntBASIC14.57□□□□□ -0.08
B020004C17RikJ3QP07 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
B020004C17RikJ3QP07 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
B020004C17RikJ3QP07 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
B020004C17RikJ3QP07 CT025694.1-201ENSMUST00000226188 934 ntBASIC14.57□□□□□ -0.08
B020004C17RikJ3QP07 Mir339-201ENSMUST00000083659 96 ntBASIC14.57□□□□□ -0.08
B020004C17RikJ3QP07 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
B020004C17RikJ3QP07 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
B020004C17RikJ3QP07 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
B020004C17RikJ3QP07 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
B020004C17RikJ3QP07 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
B020004C17RikJ3QP07 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
B020004C17RikJ3QP07 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
B020004C17RikJ3QP07 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
B020004C17RikJ3QP07 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC14.57□□□□□ -0.08
B020004C17RikJ3QP07 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
B020004C17RikJ3QP07 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
B020004C17RikJ3QP07 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
B020004C17RikJ3QP07 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
B020004C17RikJ3QP07 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
B020004C17RikJ3QP07 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
B020004C17RikJ3QP07 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
B020004C17RikJ3QP07 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
B020004C17RikJ3QP07 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
B020004C17RikJ3QP07 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
B020004C17RikJ3QP07 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
B020004C17RikJ3QP07 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
B020004C17RikJ3QP07 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
B020004C17RikJ3QP07 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
B020004C17RikJ3QP07 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
B020004C17RikJ3QP07 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
B020004C17RikJ3QP07 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC14.56□□□□□ -0.08
B020004C17RikJ3QP07 Gm12015-201ENSMUST00000117065 843 ntBASIC14.56□□□□□ -0.08
B020004C17RikJ3QP07 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.56□□□□□ -0.08
B020004C17RikJ3QP07 Gm11331-201ENSMUST00000119764 288 ntBASIC14.56□□□□□ -0.08
B020004C17RikJ3QP07 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC14.56□□□□□ -0.08
B020004C17RikJ3QP07 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
B020004C17RikJ3QP07 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC14.56□□□□□ -0.08
B020004C17RikJ3QP07 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
B020004C17RikJ3QP07 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
B020004C17RikJ3QP07 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC14.56□□□□□ -0.08
B020004C17RikJ3QP07 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
B020004C17RikJ3QP07 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
B020004C17RikJ3QP07 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
B020004C17RikJ3QP07 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC14.56□□□□□ -0.08
B020004C17RikJ3QP07 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
B020004C17RikJ3QP07 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
B020004C17RikJ3QP07 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
B020004C17RikJ3QP07 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
B020004C17RikJ3QP07 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
B020004C17RikJ3QP07 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
B020004C17RikJ3QP07 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
B020004C17RikJ3QP07 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
B020004C17RikJ3QP07 CU062626.3-201ENSMUST00000225522 1411 ntBASIC14.56□□□□□ -0.08
B020004C17RikJ3QP07 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.56□□□□□ -0.08
B020004C17RikJ3QP07 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
B020004C17RikJ3QP07 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
B020004C17RikJ3QP07 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
B020004C17RikJ3QP07 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
B020004C17RikJ3QP07 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
B020004C17RikJ3QP07 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
B020004C17RikJ3QP07 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
B020004C17RikJ3QP07 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
B020004C17RikJ3QP07 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
B020004C17RikJ3QP07 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.55□□□□□ -0.08
B020004C17RikJ3QP07 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
B020004C17RikJ3QP07 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
B020004C17RikJ3QP07 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC14.55□□□□□ -0.08
B020004C17RikJ3QP07 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
B020004C17RikJ3QP07 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
B020004C17RikJ3QP07 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
B020004C17RikJ3QP07 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC14.55□□□□□ -0.08
B020004C17RikJ3QP07 Gm8546-201ENSMUST00000178288 1264 ntBASIC14.55□□□□□ -0.08
B020004C17RikJ3QP07 Gm5523-201ENSMUST00000180415 997 ntBASIC14.55□□□□□ -0.08
B020004C17RikJ3QP07 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
B020004C17RikJ3QP07 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
B020004C17RikJ3QP07 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
B020004C17RikJ3QP07 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
B020004C17RikJ3QP07 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
B020004C17RikJ3QP07 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
B020004C17RikJ3QP07 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms