Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Shisa8J3QNX5 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Shisa8J3QNX5 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Shisa8J3QNX5 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.96□□□□□ -0.49
Shisa8J3QNX5 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.96□□□□□ -0.49
Shisa8J3QNX5 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Shisa8J3QNX5 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Shisa8J3QNX5 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Shisa8J3QNX5 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Shisa8J3QNX5 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Shisa8J3QNX5 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Shisa8J3QNX5 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Shisa8J3QNX5 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Shisa8J3QNX5 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Shisa8J3QNX5 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC11.96□□□□□ -0.49
Shisa8J3QNX5 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Shisa8J3QNX5 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.96□□□□□ -0.49
Shisa8J3QNX5 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Shisa8J3QNX5 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.96□□□□□ -0.49
Shisa8J3QNX5 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC11.96□□□□□ -0.49
Shisa8J3QNX5 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
Shisa8J3QNX5 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC11.96□□□□□ -0.49
Shisa8J3QNX5 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC11.96□□□□□ -0.49
Shisa8J3QNX5 Gm12537-201ENSMUST00000119266 1002 ntBASIC11.96□□□□□ -0.49
Shisa8J3QNX5 Gm12070-201ENSMUST00000119551 1002 ntBASIC11.96□□□□□ -0.49
Shisa8J3QNX5 Gm12671-201ENSMUST00000119978 1002 ntBASIC11.96□□□□□ -0.49
Shisa8J3QNX5 Gm13292-201ENSMUST00000120014 1000 ntBASIC11.96□□□□□ -0.49
Shisa8J3QNX5 Gm12403-201ENSMUST00000121384 959 ntBASIC11.96□□□□□ -0.49
Shisa8J3QNX5 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC11.96□□□□□ -0.49
Shisa8J3QNX5 Gm10359-201ENSMUST00000180167 1002 ntBASIC11.96□□□□□ -0.49
Shisa8J3QNX5 Gm12033-201ENSMUST00000180654 1002 ntBASIC11.96□□□□□ -0.49
Shisa8J3QNX5 Gm5559-201ENSMUST00000180755 1002 ntBASIC11.96□□□□□ -0.49
Shisa8J3QNX5 Gm4335-201ENSMUST00000182581 1004 ntBASIC11.96□□□□□ -0.49
Shisa8J3QNX5 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC11.96□□□□□ -0.49
Shisa8J3QNX5 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC11.96□□□□□ -0.49
Shisa8J3QNX5 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC11.96□□□□□ -0.49
Shisa8J3QNX5 Gm38294-201ENSMUST00000192831 381 ntBASIC11.96□□□□□ -0.49
Shisa8J3QNX5 Gm7774-201ENSMUST00000200064 533 ntBASIC11.96□□□□□ -0.49
Shisa8J3QNX5 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC11.96□□□□□ -0.49
Shisa8J3QNX5 Rbfox2-208ENSMUST00000227930 1218 ntBASIC11.96□□□□□ -0.49
Shisa8J3QNX5 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Shisa8J3QNX5 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Shisa8J3QNX5 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Shisa8J3QNX5 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Shisa8J3QNX5 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Shisa8J3QNX5 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC11.96□□□□□ -0.49
Shisa8J3QNX5 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC11.96□□□□□ -0.49
Shisa8J3QNX5 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Shisa8J3QNX5 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Shisa8J3QNX5 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Shisa8J3QNX5 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Shisa8J3QNX5 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Shisa8J3QNX5 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Shisa8J3QNX5 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Shisa8J3QNX5 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC11.96□□□□□ -0.5
Shisa8J3QNX5 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Shisa8J3QNX5 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.96□□□□□ -0.5
Shisa8J3QNX5 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Shisa8J3QNX5 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shisa8J3QNX5 Gm42690-201ENSMUST00000197921 1836 ntBASIC11.95□□□□□ -0.5
Shisa8J3QNX5 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Shisa8J3QNX5 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shisa8J3QNX5 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.95□□□□□ -0.5
Shisa8J3QNX5 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC11.95□□□□□ -0.5
Shisa8J3QNX5 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC11.95□□□□□ -0.5
Shisa8J3QNX5 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Shisa8J3QNX5 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Shisa8J3QNX5 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shisa8J3QNX5 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.95□□□□□ -0.5
Shisa8J3QNX5 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.95□□□□□ -0.5
Shisa8J3QNX5 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Shisa8J3QNX5 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shisa8J3QNX5 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shisa8J3QNX5 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shisa8J3QNX5 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.95□□□□□ -0.5
Shisa8J3QNX5 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shisa8J3QNX5 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shisa8J3QNX5 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC11.95□□□□□ -0.5
Shisa8J3QNX5 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shisa8J3QNX5 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC11.95□□□□□ -0.5
Shisa8J3QNX5 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Shisa8J3QNX5 Gm15240-201ENSMUST00000118156 720 ntBASIC11.95□□□□□ -0.5
Shisa8J3QNX5 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shisa8J3QNX5 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC11.95□□□□□ -0.5
Shisa8J3QNX5 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
Shisa8J3QNX5 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC11.95□□□□□ -0.5
Shisa8J3QNX5 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shisa8J3QNX5 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Shisa8J3QNX5 Gm8000-201ENSMUST00000188378 592 ntBASIC11.95□□□□□ -0.5
Shisa8J3QNX5 Gm10253-201ENSMUST00000194270 940 ntBASIC11.95□□□□□ -0.5
Shisa8J3QNX5 Gm43514-201ENSMUST00000198852 424 ntBASIC11.95□□□□□ -0.5
Shisa8J3QNX5 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shisa8J3QNX5 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Shisa8J3QNX5 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Shisa8J3QNX5 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shisa8J3QNX5 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shisa8J3QNX5 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shisa8J3QNX5 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Shisa8J3QNX5 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Shisa8J3QNX5 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms