Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcf11G3X9Z4 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
Pcf11G3X9Z4 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC19.55■□□□□ 0.72
Pcf11G3X9Z4 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcf11G3X9Z4 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Pcf11G3X9Z4 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcf11G3X9Z4 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
Pcf11G3X9Z4 Gm12380-201ENSMUST00000119012 544 ntBASIC19.54■□□□□ 0.72
Pcf11G3X9Z4 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Pcf11G3X9Z4 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC19.54■□□□□ 0.72
Pcf11G3X9Z4 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Pcf11G3X9Z4 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC19.54■□□□□ 0.72
Pcf11G3X9Z4 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC19.54■□□□□ 0.72
Pcf11G3X9Z4 Nsd1-205ENSMUST00000224693 852 ntBASIC19.54■□□□□ 0.72
Pcf11G3X9Z4 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC19.54■□□□□ 0.72
Pcf11G3X9Z4 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcf11G3X9Z4 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcf11G3X9Z4 Gm10176-201ENSMUST00000159707 2264 ntBASIC19.54■□□□□ 0.72
Pcf11G3X9Z4 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC19.54■□□□□ 0.72
Pcf11G3X9Z4 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcf11G3X9Z4 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcf11G3X9Z4 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Pcf11G3X9Z4 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Pcf11G3X9Z4 Gm44851-201ENSMUST00000205735 2309 ntBASIC19.54■□□□□ 0.72
Pcf11G3X9Z4 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Pcf11G3X9Z4 Gm43138-201ENSMUST00000199123 708 ntBASIC19.53■□□□□ 0.72
Pcf11G3X9Z4 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Pcf11G3X9Z4 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Pcf11G3X9Z4 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Pcf11G3X9Z4 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcf11G3X9Z4 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Pcf11G3X9Z4 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcf11G3X9Z4 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcf11G3X9Z4 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Pcf11G3X9Z4 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcf11G3X9Z4 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC19.53■□□□□ 0.72
Pcf11G3X9Z4 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcf11G3X9Z4 Rmrp-201ENSMUST00000157463 271 ntBASIC19.53■□□□□ 0.72
Pcf11G3X9Z4 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcf11G3X9Z4 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Pcf11G3X9Z4 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC19.53■□□□□ 0.72
Pcf11G3X9Z4 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Pcf11G3X9Z4 AL732506.1-201ENSMUST00000226420 281 ntBASIC19.53■□□□□ 0.72
Pcf11G3X9Z4 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcf11G3X9Z4 Gm37795-201ENSMUST00000194216 2459 ntBASIC19.53■□□□□ 0.72
Pcf11G3X9Z4 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcf11G3X9Z4 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Pcf11G3X9Z4 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcf11G3X9Z4 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Pcf11G3X9Z4 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Pcf11G3X9Z4 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcf11G3X9Z4 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcf11G3X9Z4 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcf11G3X9Z4 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcf11G3X9Z4 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC19.52■□□□□ 0.72
Pcf11G3X9Z4 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcf11G3X9Z4 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcf11G3X9Z4 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC19.52■□□□□ 0.72
Pcf11G3X9Z4 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcf11G3X9Z4 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcf11G3X9Z4 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Pcf11G3X9Z4 Gm12015-201ENSMUST00000117065 843 ntBASIC19.52■□□□□ 0.71
Pcf11G3X9Z4 Gm13296-201ENSMUST00000117854 997 ntBASIC19.52■□□□□ 0.71
Pcf11G3X9Z4 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC19.52■□□□□ 0.71
Pcf11G3X9Z4 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC19.52■□□□□ 0.71
Pcf11G3X9Z4 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Pcf11G3X9Z4 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Pcf11G3X9Z4 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Pcf11G3X9Z4 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
Pcf11G3X9Z4 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC19.52■□□□□ 0.71
Pcf11G3X9Z4 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Pcf11G3X9Z4 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Pcf11G3X9Z4 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.52■□□□□ 0.71
Pcf11G3X9Z4 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Pcf11G3X9Z4 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Pcf11G3X9Z4 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcf11G3X9Z4 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcf11G3X9Z4 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC19.51■□□□□ 0.71
Pcf11G3X9Z4 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Pcf11G3X9Z4 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC19.51■□□□□ 0.71
Pcf11G3X9Z4 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC19.51■□□□□ 0.71
Pcf11G3X9Z4 Gm28882-201ENSMUST00000185504 314 ntBASIC19.51■□□□□ 0.71
Pcf11G3X9Z4 Gm7003-201ENSMUST00000195089 312 ntBASIC19.51■□□□□ 0.71
Pcf11G3X9Z4 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC19.51■□□□□ 0.71
Pcf11G3X9Z4 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcf11G3X9Z4 Gm5385-201ENSMUST00000118988 1559 ntBASIC19.51■□□□□ 0.71
Pcf11G3X9Z4 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcf11G3X9Z4 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcf11G3X9Z4 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcf11G3X9Z4 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
Pcf11G3X9Z4 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcf11G3X9Z4 Gm43858-201ENSMUST00000199418 1778 ntBASIC19.5■□□□□ 0.71
Pcf11G3X9Z4 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcf11G3X9Z4 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcf11G3X9Z4 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Pcf11G3X9Z4 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Pcf11G3X9Z4 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Pcf11G3X9Z4 Gm9083-201ENSMUST00000120423 819 ntBASIC19.5■□□□□ 0.71
Pcf11G3X9Z4 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Pcf11G3X9Z4 AC166344.1-202ENSMUST00000224139 234 ntBASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms