Protein–RNA interactions for Protein: F6XDR3

Gm10542, Predicted gene 10542, mousemouse

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10542F6XDR3 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Gm10542F6XDR3 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC9.11□□□□□ -0.95
Gm10542F6XDR3 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Gm10542F6XDR3 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Gm10542F6XDR3 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Gm10542F6XDR3 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Gm10542F6XDR3 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Gm10542F6XDR3 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Gm10542F6XDR3 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Gm10542F6XDR3 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC9.11□□□□□ -0.95
Gm10542F6XDR3 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Gm10542F6XDR3 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Gm10542F6XDR3 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Gm10542F6XDR3 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
Gm10542F6XDR3 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Gm10542F6XDR3 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Gm10542F6XDR3 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Gm10542F6XDR3 Gm42480-201ENSMUST00000198434 2595 ntBASIC9.11□□□□□ -0.95
Gm10542F6XDR3 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC9.11□□□□□ -0.95
Gm10542F6XDR3 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC9.11□□□□□ -0.95
Gm10542F6XDR3 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Gm10542F6XDR3 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Gm10542F6XDR3 Gm27622-201ENSMUST00000183779 60 ntBASIC9.11□□□□□ -0.95
Gm10542F6XDR3 Gm10766-202ENSMUST00000194123 606 ntBASIC9.11□□□□□ -0.95
Gm10542F6XDR3 Gm10253-201ENSMUST00000194270 940 ntBASIC9.11□□□□□ -0.95
Gm10542F6XDR3 Gm45841-201ENSMUST00000207700 164 ntBASIC9.11□□□□□ -0.95
Gm10542F6XDR3 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Gm10542F6XDR3 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Gm10542F6XDR3 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Gm10542F6XDR3 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Gm10542F6XDR3 AC241621.2-201ENSMUST00000223991 2151 ntBASIC9.11□□□□□ -0.95
Gm10542F6XDR3 Gm42748-201ENSMUST00000199354 2341 ntBASIC9.11□□□□□ -0.95
Gm10542F6XDR3 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Gm10542F6XDR3 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Gm10542F6XDR3 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Gm10542F6XDR3 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Gm10542F6XDR3 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC9.11□□□□□ -0.95
Gm10542F6XDR3 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Gm10542F6XDR3 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Gm10542F6XDR3 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Gm10542F6XDR3 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Gm10542F6XDR3 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Gm10542F6XDR3 Matn2-203ENSMUST00000226766 3252 ntBASIC9.11□□□□□ -0.95
Gm10542F6XDR3 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC9.11□□□□□ -0.95
Gm10542F6XDR3 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC9.1□□□□□ -0.95
Gm10542F6XDR3 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Gm10542F6XDR3 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Gm10542F6XDR3 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Gm10542F6XDR3 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC9.1□□□□□ -0.95
Gm10542F6XDR3 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
Gm10542F6XDR3 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Gm10542F6XDR3 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Gm10542F6XDR3 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC9.1□□□□□ -0.95
Gm10542F6XDR3 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Gm10542F6XDR3 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Gm10542F6XDR3 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Gm10542F6XDR3 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
Gm10542F6XDR3 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Gm10542F6XDR3 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Gm10542F6XDR3 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC9.1□□□□□ -0.95
Gm10542F6XDR3 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Gm10542F6XDR3 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC9.1□□□□□ -0.95
Gm10542F6XDR3 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Gm10542F6XDR3 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC9.1□□□□□ -0.95
Gm10542F6XDR3 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Gm10542F6XDR3 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Gm10542F6XDR3 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC9.1□□□□□ -0.95
Gm10542F6XDR3 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Gm10542F6XDR3 Gm27533-201ENSMUST00000183800 152 ntBASIC9.1□□□□□ -0.95
Gm10542F6XDR3 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC9.1□□□□□ -0.95
Gm10542F6XDR3 AC225888.1-201ENSMUST00000227184 728 ntBASIC9.1□□□□□ -0.95
Gm10542F6XDR3 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Gm10542F6XDR3 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Gm10542F6XDR3 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Gm10542F6XDR3 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Gm10542F6XDR3 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC9.1□□□□□ -0.95
Gm10542F6XDR3 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Gm10542F6XDR3 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Gm10542F6XDR3 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC9.1□□□□□ -0.95
Gm10542F6XDR3 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC9.1□□□□□ -0.95
Gm10542F6XDR3 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC9.1□□□□□ -0.95
Gm10542F6XDR3 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Gm10542F6XDR3 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Gm10542F6XDR3 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Gm10542F6XDR3 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Gm10542F6XDR3 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Gm10542F6XDR3 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Gm10542F6XDR3 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Gm10542F6XDR3 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Gm10542F6XDR3 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Gm10542F6XDR3 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Gm10542F6XDR3 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC9.1□□□□□ -0.95
Gm10542F6XDR3 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Gm10542F6XDR3 Gm17435-202ENSMUST00000212699 1998 ntBASIC9.1□□□□□ -0.95
Gm10542F6XDR3 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Gm10542F6XDR3 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Gm10542F6XDR3 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC9.1□□□□□ -0.95
Gm10542F6XDR3 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Gm10542F6XDR3 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Gm10542F6XDR3 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms