Protein–RNA interactions for Protein: F6SEU4

Syngap1, Ras/Rap GTPase-activating protein SynGAP, mousemouse

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syngap1F6SEU4 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Syngap1F6SEU4 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.75□□□□□ -0.05
Syngap1F6SEU4 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Syngap1F6SEU4 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Syngap1F6SEU4 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Syngap1F6SEU4 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Syngap1F6SEU4 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Syngap1F6SEU4 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Syngap1F6SEU4 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Syngap1F6SEU4 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Syngap1F6SEU4 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Syngap1F6SEU4 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Syngap1F6SEU4 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Syngap1F6SEU4 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Syngap1F6SEU4 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Syngap1F6SEU4 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Syngap1F6SEU4 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Syngap1F6SEU4 Gm6023-201ENSMUST00000118217 606 ntBASIC14.74□□□□□ -0.05
Syngap1F6SEU4 Gm14130-201ENSMUST00000118417 987 ntBASIC14.74□□□□□ -0.05
Syngap1F6SEU4 Gm12403-201ENSMUST00000121384 959 ntBASIC14.74□□□□□ -0.05
Syngap1F6SEU4 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Syngap1F6SEU4 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
Syngap1F6SEU4 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC14.74□□□□□ -0.05
Syngap1F6SEU4 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Syngap1F6SEU4 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Syngap1F6SEU4 Gm4335-201ENSMUST00000182581 1004 ntBASIC14.74□□□□□ -0.05
Syngap1F6SEU4 Mir6958-201ENSMUST00000184207 73 ntBASIC14.74□□□□□ -0.05
Syngap1F6SEU4 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC14.74□□□□□ -0.05
Syngap1F6SEU4 Gm37497-201ENSMUST00000195830 798 ntBASIC14.74□□□□□ -0.05
Syngap1F6SEU4 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC14.74□□□□□ -0.05
Syngap1F6SEU4 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Syngap1F6SEU4 Gm44551-201ENSMUST00000208804 171 ntBASIC14.74□□□□□ -0.05
Syngap1F6SEU4 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC14.74□□□□□ -0.05
Syngap1F6SEU4 CT025533.2-201ENSMUST00000228715 1248 ntBASIC14.74□□□□□ -0.05
Syngap1F6SEU4 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Syngap1F6SEU4 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Syngap1F6SEU4 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Syngap1F6SEU4 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Syngap1F6SEU4 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Syngap1F6SEU4 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Syngap1F6SEU4 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Syngap1F6SEU4 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Syngap1F6SEU4 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Syngap1F6SEU4 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Syngap1F6SEU4 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Syngap1F6SEU4 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Syngap1F6SEU4 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC14.74□□□□□ -0.05
Syngap1F6SEU4 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Syngap1F6SEU4 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Syngap1F6SEU4 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Syngap1F6SEU4 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Syngap1F6SEU4 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Syngap1F6SEU4 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Syngap1F6SEU4 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Syngap1F6SEU4 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Syngap1F6SEU4 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Syngap1F6SEU4 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Syngap1F6SEU4 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Syngap1F6SEU4 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.73□□□□□ -0.05
Syngap1F6SEU4 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Syngap1F6SEU4 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Syngap1F6SEU4 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Syngap1F6SEU4 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Syngap1F6SEU4 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Syngap1F6SEU4 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Syngap1F6SEU4 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Syngap1F6SEU4 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Syngap1F6SEU4 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC14.73□□□□□ -0.05
Syngap1F6SEU4 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC14.73□□□□□ -0.05
Syngap1F6SEU4 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC14.73□□□□□ -0.05
Syngap1F6SEU4 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC14.73□□□□□ -0.05
Syngap1F6SEU4 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC14.73□□□□□ -0.05
Syngap1F6SEU4 Gm18584-201ENSMUST00000203098 964 ntBASIC14.73□□□□□ -0.05
Syngap1F6SEU4 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC14.73□□□□□ -0.05
Syngap1F6SEU4 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Syngap1F6SEU4 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Syngap1F6SEU4 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Syngap1F6SEU4 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Syngap1F6SEU4 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Syngap1F6SEU4 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC14.73□□□□□ -0.05
Syngap1F6SEU4 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Syngap1F6SEU4 Gm15544-201ENSMUST00000118776 1531 ntBASIC14.73□□□□□ -0.05
Syngap1F6SEU4 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Syngap1F6SEU4 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Syngap1F6SEU4 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Syngap1F6SEU4 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Syngap1F6SEU4 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Syngap1F6SEU4 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Syngap1F6SEU4 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Syngap1F6SEU4 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC14.73□□□□□ -0.05
Syngap1F6SEU4 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Syngap1F6SEU4 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Syngap1F6SEU4 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Syngap1F6SEU4 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Syngap1F6SEU4 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Syngap1F6SEU4 Acot6-202ENSMUST00000222921 3622 ntBASIC14.73□□□□□ -0.05
Syngap1F6SEU4 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Syngap1F6SEU4 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Syngap1F6SEU4 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Syngap1F6SEU4 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms