Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cpsf4lE9Q2N0 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC11.11□□□□□ -0.63
Cpsf4lE9Q2N0 Gm12203-201ENSMUST00000118235 598 ntBASIC11.11□□□□□ -0.63
Cpsf4lE9Q2N0 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC11.11□□□□□ -0.63
Cpsf4lE9Q2N0 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cpsf4lE9Q2N0 Gm12209-201ENSMUST00000120089 596 ntBASIC11.11□□□□□ -0.63
Cpsf4lE9Q2N0 Gm13123-201ENSMUST00000122173 492 ntBASIC11.11□□□□□ -0.63
Cpsf4lE9Q2N0 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cpsf4lE9Q2N0 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC11.11□□□□□ -0.63
Cpsf4lE9Q2N0 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cpsf4lE9Q2N0 Gm28693-202ENSMUST00000190758 331 ntBASIC11.11□□□□□ -0.63
Cpsf4lE9Q2N0 Gm37922-201ENSMUST00000195596 455 ntBASIC11.11□□□□□ -0.63
Cpsf4lE9Q2N0 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Cpsf4lE9Q2N0 Gm44799-201ENSMUST00000207639 1202 ntBASIC11.11□□□□□ -0.63
Cpsf4lE9Q2N0 Gm6458-201ENSMUST00000211573 635 ntBASIC11.11□□□□□ -0.63
Cpsf4lE9Q2N0 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC11.11□□□□□ -0.63
Cpsf4lE9Q2N0 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cpsf4lE9Q2N0 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cpsf4lE9Q2N0 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC11.11□□□□□ -0.63
Cpsf4lE9Q2N0 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cpsf4lE9Q2N0 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cpsf4lE9Q2N0 Gm38094-201ENSMUST00000195864 2978 ntBASIC11.11□□□□□ -0.63
Cpsf4lE9Q2N0 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cpsf4lE9Q2N0 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cpsf4lE9Q2N0 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cpsf4lE9Q2N0 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cpsf4lE9Q2N0 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cpsf4lE9Q2N0 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cpsf4lE9Q2N0 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cpsf4lE9Q2N0 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC11.11□□□□□ -0.63
Cpsf4lE9Q2N0 Gm45684-201ENSMUST00000210244 1571 ntBASIC11.11□□□□□ -0.63
Cpsf4lE9Q2N0 Gm8131-201ENSMUST00000213783 1570 ntBASIC11.11□□□□□ -0.63
Cpsf4lE9Q2N0 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cpsf4lE9Q2N0 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cpsf4lE9Q2N0 Gm45706-201ENSMUST00000213063 2136 ntBASIC11.11□□□□□ -0.63
Cpsf4lE9Q2N0 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cpsf4lE9Q2N0 Gm8798-201ENSMUST00000211877 1661 ntBASIC11.11□□□□□ -0.63
Cpsf4lE9Q2N0 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cpsf4lE9Q2N0 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cpsf4lE9Q2N0 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cpsf4lE9Q2N0 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cpsf4lE9Q2N0 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cpsf4lE9Q2N0 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cpsf4lE9Q2N0 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cpsf4lE9Q2N0 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cpsf4lE9Q2N0 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cpsf4lE9Q2N0 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cpsf4lE9Q2N0 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cpsf4lE9Q2N0 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Cpsf4lE9Q2N0 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Cpsf4lE9Q2N0 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cpsf4lE9Q2N0 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cpsf4lE9Q2N0 Gm8805-201ENSMUST00000117848 313 ntBASIC11.1□□□□□ -0.63
Cpsf4lE9Q2N0 Gm13369-201ENSMUST00000119442 987 ntBASIC11.1□□□□□ -0.63
Cpsf4lE9Q2N0 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC11.1□□□□□ -0.63
Cpsf4lE9Q2N0 Gm22331-201ENSMUST00000158066 136 ntBASIC11.1□□□□□ -0.63
Cpsf4lE9Q2N0 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC11.1□□□□□ -0.63
Cpsf4lE9Q2N0 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cpsf4lE9Q2N0 Gm27847-201ENSMUST00000183711 107 ntBASIC11.1□□□□□ -0.63
Cpsf4lE9Q2N0 Gm27375-201ENSMUST00000183799 107 ntBASIC11.1□□□□□ -0.63
Cpsf4lE9Q2N0 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC11.1□□□□□ -0.63
Cpsf4lE9Q2N0 Gm38297-201ENSMUST00000195122 1057 ntBASIC11.1□□□□□ -0.63
Cpsf4lE9Q2N0 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC11.1□□□□□ -0.63
Cpsf4lE9Q2N0 Gm7561-201ENSMUST00000211203 886 ntBASIC11.1□□□□□ -0.63
Cpsf4lE9Q2N0 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC11.1□□□□□ -0.63
Cpsf4lE9Q2N0 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC11.1□□□□□ -0.63
Cpsf4lE9Q2N0 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cpsf4lE9Q2N0 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cpsf4lE9Q2N0 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cpsf4lE9Q2N0 Gm6091-201ENSMUST00000098307 165 ntBASIC11.1□□□□□ -0.63
Cpsf4lE9Q2N0 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
Cpsf4lE9Q2N0 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cpsf4lE9Q2N0 Gm5385-201ENSMUST00000118988 1559 ntBASIC11.1□□□□□ -0.63
Cpsf4lE9Q2N0 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cpsf4lE9Q2N0 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Cpsf4lE9Q2N0 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cpsf4lE9Q2N0 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cpsf4lE9Q2N0 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Cpsf4lE9Q2N0 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Cpsf4lE9Q2N0 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cpsf4lE9Q2N0 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Cpsf4lE9Q2N0 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cpsf4lE9Q2N0 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Cpsf4lE9Q2N0 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cpsf4lE9Q2N0 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.09□□□□□ -0.63
Cpsf4lE9Q2N0 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cpsf4lE9Q2N0 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cpsf4lE9Q2N0 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cpsf4lE9Q2N0 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cpsf4lE9Q2N0 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cpsf4lE9Q2N0 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cpsf4lE9Q2N0 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cpsf4lE9Q2N0 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cpsf4lE9Q2N0 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cpsf4lE9Q2N0 Gm38049-201ENSMUST00000195698 1372 ntBASIC11.09□□□□□ -0.63
Cpsf4lE9Q2N0 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC11.09□□□□□ -0.63
Cpsf4lE9Q2N0 AC101945.2-201ENSMUST00000227886 1377 ntBASIC11.09□□□□□ -0.63
Cpsf4lE9Q2N0 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC11.09□□□□□ -0.63
Cpsf4lE9Q2N0 Gm24644-201ENSMUST00000157114 139 ntBASIC11.09□□□□□ -0.63
Cpsf4lE9Q2N0 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 88.3 ms