Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm28043E0CXC2 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm28043E0CXC2 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Gm28043E0CXC2 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm28043E0CXC2 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm28043E0CXC2 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gm28043E0CXC2 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Gm28043E0CXC2 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gm28043E0CXC2 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC13.18□□□□□ -0.3
Gm28043E0CXC2 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm28043E0CXC2 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Gm28043E0CXC2 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm28043E0CXC2 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gm28043E0CXC2 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm28043E0CXC2 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gm28043E0CXC2 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm28043E0CXC2 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.17□□□□□ -0.3
Gm28043E0CXC2 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm28043E0CXC2 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Gm28043E0CXC2 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.17□□□□□ -0.3
Gm28043E0CXC2 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm28043E0CXC2 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm28043E0CXC2 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm28043E0CXC2 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm28043E0CXC2 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm28043E0CXC2 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gm28043E0CXC2 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Gm28043E0CXC2 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm28043E0CXC2 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm28043E0CXC2 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm28043E0CXC2 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.17□□□□□ -0.3
Gm28043E0CXC2 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.17□□□□□ -0.3
Gm28043E0CXC2 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm28043E0CXC2 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC13.17□□□□□ -0.3
Gm28043E0CXC2 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.17□□□□□ -0.3
Gm28043E0CXC2 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.17□□□□□ -0.3
Gm28043E0CXC2 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gm28043E0CXC2 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.17□□□□□ -0.3
Gm28043E0CXC2 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gm28043E0CXC2 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gm28043E0CXC2 Gm17795-201ENSMUST00000214505 757 ntBASIC13.17□□□□□ -0.3
Gm28043E0CXC2 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.17□□□□□ -0.3
Gm28043E0CXC2 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm28043E0CXC2 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm28043E0CXC2 Gm9797-201ENSMUST00000052902 613 ntBASIC13.17□□□□□ -0.3
Gm28043E0CXC2 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Gm28043E0CXC2 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm28043E0CXC2 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm28043E0CXC2 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.17□□□□□ -0.3
Gm28043E0CXC2 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.17□□□□□ -0.3
Gm28043E0CXC2 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm28043E0CXC2 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.17□□□□□ -0.3
Gm28043E0CXC2 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.17□□□□□ -0.3
Gm28043E0CXC2 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm28043E0CXC2 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm28043E0CXC2 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Gm28043E0CXC2 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm28043E0CXC2 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gm28043E0CXC2 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm28043E0CXC2 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC13.16□□□□□ -0.3
Gm28043E0CXC2 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm28043E0CXC2 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm28043E0CXC2 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Gm28043E0CXC2 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm28043E0CXC2 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm28043E0CXC2 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm28043E0CXC2 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gm28043E0CXC2 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm28043E0CXC2 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gm28043E0CXC2 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gm28043E0CXC2 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.16□□□□□ -0.3
Gm28043E0CXC2 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm28043E0CXC2 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm28043E0CXC2 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.16□□□□□ -0.3
Gm28043E0CXC2 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm28043E0CXC2 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm28043E0CXC2 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm28043E0CXC2 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.16□□□□□ -0.3
Gm28043E0CXC2 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC13.16□□□□□ -0.3
Gm28043E0CXC2 Gm27772-201ENSMUST00000184900 187 ntBASIC13.16□□□□□ -0.3
Gm28043E0CXC2 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Gm28043E0CXC2 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gm28043E0CXC2 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.16□□□□□ -0.3
Gm28043E0CXC2 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Gm28043E0CXC2 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.16□□□□□ -0.3
Gm28043E0CXC2 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.16□□□□□ -0.3
Gm28043E0CXC2 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.16□□□□□ -0.3
Gm28043E0CXC2 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.16□□□□□ -0.3
Gm28043E0CXC2 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm28043E0CXC2 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm28043E0CXC2 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm28043E0CXC2 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm28043E0CXC2 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm28043E0CXC2 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm28043E0CXC2 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm28043E0CXC2 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm28043E0CXC2 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.16□□□□□ -0.3
Gm28043E0CXC2 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gm28043E0CXC2 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
Gm28043E0CXC2 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms