Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.84□□□□□ -0.35
Chd3B1AR17 Olfr284-202ENSMUST00000206647 966 ntBASIC12.84□□□□□ -0.35
Chd3B1AR17 Gm45880-201ENSMUST00000213041 853 ntBASIC12.84□□□□□ -0.35
Chd3B1AR17 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Chd3B1AR17 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chd3B1AR17 Olfr582-201ENSMUST00000098212 960 ntBASIC12.84□□□□□ -0.35
Chd3B1AR17 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chd3B1AR17 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chd3B1AR17 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Chd3B1AR17 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Chd3B1AR17 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chd3B1AR17 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chd3B1AR17 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chd3B1AR17 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chd3B1AR17 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Chd3B1AR17 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Chd3B1AR17 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chd3B1AR17 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.84□□□□□ -0.35
Chd3B1AR17 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Chd3B1AR17 Gm29396-201ENSMUST00000185659 716 ntBASIC12.84□□□□□ -0.35
Chd3B1AR17 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.84□□□□□ -0.35
Chd3B1AR17 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chd3B1AR17 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Chd3B1AR17 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.84□□□□□ -0.35
Chd3B1AR17 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Chd3B1AR17 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Chd3B1AR17 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Chd3B1AR17 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chd3B1AR17 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chd3B1AR17 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Chd3B1AR17 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chd3B1AR17 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chd3B1AR17 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chd3B1AR17 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chd3B1AR17 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.83□□□□□ -0.36
Chd3B1AR17 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chd3B1AR17 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Chd3B1AR17 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Chd3B1AR17 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chd3B1AR17 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chd3B1AR17 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chd3B1AR17 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chd3B1AR17 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.83□□□□□ -0.36
Chd3B1AR17 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.83□□□□□ -0.36
Chd3B1AR17 Gm25043-201ENSMUST00000158604 212 ntBASIC12.83□□□□□ -0.36
Chd3B1AR17 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Chd3B1AR17 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.83□□□□□ -0.36
Chd3B1AR17 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Chd3B1AR17 Gm3786-201ENSMUST00000202659 378 ntBASIC12.83□□□□□ -0.36
Chd3B1AR17 Gm3961-201ENSMUST00000204425 994 ntBASIC12.83□□□□□ -0.36
Chd3B1AR17 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chd3B1AR17 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chd3B1AR17 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chd3B1AR17 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chd3B1AR17 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chd3B1AR17 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chd3B1AR17 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Chd3B1AR17 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Chd3B1AR17 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chd3B1AR17 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.83□□□□□ -0.36
Chd3B1AR17 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chd3B1AR17 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chd3B1AR17 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Chd3B1AR17 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chd3B1AR17 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.83□□□□□ -0.36
Chd3B1AR17 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chd3B1AR17 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Chd3B1AR17 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Chd3B1AR17 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Chd3B1AR17 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.82□□□□□ -0.36
Chd3B1AR17 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Chd3B1AR17 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.82□□□□□ -0.36
Chd3B1AR17 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.82□□□□□ -0.36
Chd3B1AR17 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Chd3B1AR17 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Chd3B1AR17 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chd3B1AR17 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chd3B1AR17 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chd3B1AR17 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Chd3B1AR17 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chd3B1AR17 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Chd3B1AR17 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chd3B1AR17 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chd3B1AR17 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chd3B1AR17 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chd3B1AR17 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Chd3B1AR17 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chd3B1AR17 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chd3B1AR17 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chd3B1AR17 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chd3B1AR17 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.82□□□□□ -0.36
Chd3B1AR17 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.82□□□□□ -0.36
Chd3B1AR17 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Chd3B1AR17 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Chd3B1AR17 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chd3B1AR17 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Chd3B1AR17 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chd3B1AR17 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Chd3B1AR17 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.82□□□□□ -0.36
Chd3B1AR17 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms