Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Ubr4A2AN08 Gm12345-201ENSMUST00000119288 898 ntBASIC6.72□□□□□ -1.33
Ubr4A2AN08 Gm15815-201ENSMUST00000120569 255 ntBASIC6.72□□□□□ -1.33
Ubr4A2AN08 Gm15489-201ENSMUST00000132811 973 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Ubr4A2AN08 6430503K07Rik-201ENSMUST00000144411 476 ntTSL 2 BASIC6.72□□□□□ -1.33
Ubr4A2AN08 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
Ubr4A2AN08 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC6.72□□□□□ -1.33
Ubr4A2AN08 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Ubr4A2AN08 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ubr4A2AN08 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ubr4A2AN08 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Ubr4A2AN08 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC6.72□□□□□ -1.33
Ubr4A2AN08 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ubr4A2AN08 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC6.72□□□□□ -1.33
Ubr4A2AN08 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ubr4A2AN08 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Ubr4A2AN08 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ubr4A2AN08 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Ubr4A2AN08 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Ubr4A2AN08 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ubr4A2AN08 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Ubr4A2AN08 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ubr4A2AN08 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC6.72□□□□□ -1.33
Ubr4A2AN08 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ubr4A2AN08 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC6.72□□□□□ -1.33
Ubr4A2AN08 Gm11500-201ENSMUST00000118237 601 ntBASIC6.72□□□□□ -1.33
Ubr4A2AN08 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Ubr4A2AN08 Olfr209-202ENSMUST00000208246 428 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Ubr4A2AN08 Gm8186-201ENSMUST00000053575 386 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Ubr4A2AN08 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ubr4A2AN08 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ubr4A2AN08 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ubr4A2AN08 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ubr4A2AN08 Gm18782-201ENSMUST00000209023 1399 ntBASIC6.72□□□□□ -1.33
Ubr4A2AN08 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ubr4A2AN08 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ubr4A2AN08 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC6.72□□□□□ -1.33
Ubr4A2AN08 Gm18776-201ENSMUST00000188833 654 ntBASIC6.72□□□□□ -1.33
Ubr4A2AN08 Gm45812-201ENSMUST00000212199 192 ntTSL 5 BASIC6.72□□□□□ -1.33
Ubr4A2AN08 AC154461.1-201ENSMUST00000224207 1005 ntBASIC6.72□□□□□ -1.33
Ubr4A2AN08 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ubr4A2AN08 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Ubr4A2AN08 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC6.72□□□□□ -1.33
Ubr4A2AN08 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ubr4A2AN08 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ubr4A2AN08 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ubr4A2AN08 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ubr4A2AN08 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
Ubr4A2AN08 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Ubr4A2AN08 Gm43697-201ENSMUST00000199637 2581 ntBASIC6.72□□□□□ -1.33
Ubr4A2AN08 AC126549.2-201ENSMUST00000223997 1976 ntBASIC6.72□□□□□ -1.33
Ubr4A2AN08 Gm45630-201ENSMUST00000210243 1911 ntBASIC6.72□□□□□ -1.33
Ubr4A2AN08 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ubr4A2AN08 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Ubr4A2AN08 Gm13981-201ENSMUST00000122360 447 ntBASIC6.72□□□□□ -1.33
Ubr4A2AN08 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ubr4A2AN08 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Ubr4A2AN08 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC6.72□□□□□ -1.33
Ubr4A2AN08 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ubr4A2AN08 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Ubr4A2AN08 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Ubr4A2AN08 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ubr4A2AN08 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Ubr4A2AN08 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Ubr4A2AN08 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC6.71□□□□□ -1.33
Ubr4A2AN08 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC6.71□□□□□ -1.33
Ubr4A2AN08 Gm23400-201ENSMUST00000174994 102 ntBASIC6.71□□□□□ -1.33
Ubr4A2AN08 Gm26463-201ENSMUST00000175065 101 ntBASIC6.71□□□□□ -1.33
Ubr4A2AN08 Gm24332-201ENSMUST00000175102 102 ntBASIC6.71□□□□□ -1.33
Ubr4A2AN08 Gm25959-201ENSMUST00000175112 102 ntBASIC6.71□□□□□ -1.33
Ubr4A2AN08 Gm22475-201ENSMUST00000175169 102 ntBASIC6.71□□□□□ -1.33
Ubr4A2AN08 Gm22903-201ENSMUST00000175193 102 ntBASIC6.71□□□□□ -1.33
Ubr4A2AN08 Gm25070-201ENSMUST00000175237 102 ntBASIC6.71□□□□□ -1.33
Ubr4A2AN08 Gm24159-201ENSMUST00000175264 102 ntBASIC6.71□□□□□ -1.33
Ubr4A2AN08 Gm25299-201ENSMUST00000175283 102 ntBASIC6.71□□□□□ -1.33
Ubr4A2AN08 Gm23798-201ENSMUST00000175560 102 ntBASIC6.71□□□□□ -1.33
Ubr4A2AN08 Gm23802-201ENSMUST00000175565 102 ntBASIC6.71□□□□□ -1.33
Ubr4A2AN08 Gm25708-201ENSMUST00000177687 102 ntBASIC6.71□□□□□ -1.33
Ubr4A2AN08 Gm24370-201ENSMUST00000178007 102 ntBASIC6.71□□□□□ -1.33
Ubr4A2AN08 Gm23049-201ENSMUST00000178068 102 ntBASIC6.71□□□□□ -1.33
Ubr4A2AN08 Gm28019-201ENSMUST00000178138 101 ntBASIC6.71□□□□□ -1.33
Ubr4A2AN08 Gm25571-201ENSMUST00000178322 102 ntBASIC6.71□□□□□ -1.33
Ubr4A2AN08 Gm25355-201ENSMUST00000178456 101 ntBASIC6.71□□□□□ -1.33
Ubr4A2AN08 Gm24975-201ENSMUST00000178492 101 ntBASIC6.71□□□□□ -1.33
Ubr4A2AN08 Gm23189-201ENSMUST00000178954 102 ntBASIC6.71□□□□□ -1.33
Ubr4A2AN08 Gm25100-201ENSMUST00000179750 101 ntBASIC6.71□□□□□ -1.33
Ubr4A2AN08 Gm23064-201ENSMUST00000179866 101 ntBASIC6.71□□□□□ -1.33
Ubr4A2AN08 CT009536.2-201ENSMUST00000225370 665 ntBASIC6.71□□□□□ -1.33
Ubr4A2AN08 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Ubr4A2AN08 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Ubr4A2AN08 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
Ubr4A2AN08 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Ubr4A2AN08 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Ubr4A2AN08 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Ubr4A2AN08 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC6.71□□□□□ -1.33
Ubr4A2AN08 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Ubr4A2AN08 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Ubr4A2AN08 Gm9992-201ENSMUST00000070059 1593 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Ubr4A2AN08 Smim24-201ENSMUST00000105322 901 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Ubr4A2AN08 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC6.71□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 95.4 ms