Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC10.57□□□□□ -0.72
Trav12d-1A0N8R0 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav12d-1A0N8R0 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav12d-1A0N8R0 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav12d-1A0N8R0 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav12d-1A0N8R0 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav12d-1A0N8R0 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav12d-1A0N8R0 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav12d-1A0N8R0 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav12d-1A0N8R0 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav12d-1A0N8R0 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav12d-1A0N8R0 Gm45266-201ENSMUST00000210111 2173 ntBASIC10.56□□□□□ -0.72
Trav12d-1A0N8R0 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav12d-1A0N8R0 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Trav12d-1A0N8R0 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav12d-1A0N8R0 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav12d-1A0N8R0 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav12d-1A0N8R0 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav12d-1A0N8R0 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav12d-1A0N8R0 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav12d-1A0N8R0 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav12d-1A0N8R0 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC10.56□□□□□ -0.72
Trav12d-1A0N8R0 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav12d-1A0N8R0 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav12d-1A0N8R0 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav12d-1A0N8R0 Gm14822-201ENSMUST00000122247 291 ntBASIC10.56□□□□□ -0.72
Trav12d-1A0N8R0 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC10.56□□□□□ -0.72
Trav12d-1A0N8R0 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC10.56□□□□□ -0.72
Trav12d-1A0N8R0 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC10.56□□□□□ -0.72
Trav12d-1A0N8R0 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC10.56□□□□□ -0.72
Trav12d-1A0N8R0 Gm6888-201ENSMUST00000221983 706 ntBASIC10.56□□□□□ -0.72
Trav12d-1A0N8R0 Zkscan3-207ENSMUST00000223831 2101 ntBASIC10.56□□□□□ -0.72
Trav12d-1A0N8R0 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav12d-1A0N8R0 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav12d-1A0N8R0 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav12d-1A0N8R0 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav12d-1A0N8R0 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav12d-1A0N8R0 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav12d-1A0N8R0 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Trav12d-1A0N8R0 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav12d-1A0N8R0 AC096628.2-201ENSMUST00000225443 1413 ntBASIC10.56□□□□□ -0.72
Trav12d-1A0N8R0 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav12d-1A0N8R0 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav12d-1A0N8R0 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC10.56□□□□□ -0.72
Trav12d-1A0N8R0 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Trav12d-1A0N8R0 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav12d-1A0N8R0 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav12d-1A0N8R0 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Trav12d-1A0N8R0 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav12d-1A0N8R0 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav12d-1A0N8R0 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav12d-1A0N8R0 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC10.56□□□□□ -0.72
Trav12d-1A0N8R0 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav12d-1A0N8R0 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav12d-1A0N8R0 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav12d-1A0N8R0 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav12d-1A0N8R0 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav12d-1A0N8R0 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC10.55□□□□□ -0.72
Trav12d-1A0N8R0 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav12d-1A0N8R0 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav12d-1A0N8R0 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav12d-1A0N8R0 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
Trav12d-1A0N8R0 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav12d-1A0N8R0 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav12d-1A0N8R0 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC10.55□□□□□ -0.72
Trav12d-1A0N8R0 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav12d-1A0N8R0 Gm4875-201ENSMUST00000118257 786 ntBASIC10.55□□□□□ -0.72
Trav12d-1A0N8R0 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC10.55□□□□□ -0.72
Trav12d-1A0N8R0 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC10.55□□□□□ -0.72
Trav12d-1A0N8R0 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC10.55□□□□□ -0.72
Trav12d-1A0N8R0 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav12d-1A0N8R0 Gm27618-201ENSMUST00000183671 60 ntBASIC10.55□□□□□ -0.72
Trav12d-1A0N8R0 Gm2756-201ENSMUST00000195851 400 ntBASIC10.55□□□□□ -0.72
Trav12d-1A0N8R0 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC10.55□□□□□ -0.72
Trav12d-1A0N8R0 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav12d-1A0N8R0 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav12d-1A0N8R0 Gm8396-201ENSMUST00000057361 823 ntBASIC10.55□□□□□ -0.72
Trav12d-1A0N8R0 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav12d-1A0N8R0 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav12d-1A0N8R0 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav12d-1A0N8R0 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav12d-1A0N8R0 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav12d-1A0N8R0 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav12d-1A0N8R0 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav12d-1A0N8R0 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav12d-1A0N8R0 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC10.55□□□□□ -0.72
Trav12d-1A0N8R0 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav12d-1A0N8R0 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav12d-1A0N8R0 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav12d-1A0N8R0 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav12d-1A0N8R0 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav12d-1A0N8R0 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC10.55□□□□□ -0.72
Trav12d-1A0N8R0 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
Trav12d-1A0N8R0 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav12d-1A0N8R0 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC10.55□□□□□ -0.72
Trav12d-1A0N8R0 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC10.55□□□□□ -0.72
Trav12d-1A0N8R0 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
Trav12d-1A0N8R0 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav12d-1A0N8R0 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav12d-1A0N8R0 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms