Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC11.03□□□□□ -0.64
Trav5-4A0A075B652 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Trav5-4A0A075B652 AC159114.1-201ENSMUST00000220349 266 ntBASIC11.03□□□□□ -0.64
Trav5-4A0A075B652 Gm17330-201ENSMUST00000221047 165 ntBASIC11.03□□□□□ -0.64
Trav5-4A0A075B652 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav5-4A0A075B652 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav5-4A0A075B652 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav5-4A0A075B652 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Trav5-4A0A075B652 AC238940.1-201ENSMUST00000225106 1858 ntBASIC11.03□□□□□ -0.64
Trav5-4A0A075B652 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav5-4A0A075B652 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav5-4A0A075B652 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav5-4A0A075B652 Gm6263-201ENSMUST00000120029 1342 ntBASIC11.03□□□□□ -0.64
Trav5-4A0A075B652 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Trav5-4A0A075B652 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav5-4A0A075B652 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav5-4A0A075B652 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC11.03□□□□□ -0.64
Trav5-4A0A075B652 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav5-4A0A075B652 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav5-4A0A075B652 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Trav5-4A0A075B652 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav5-4A0A075B652 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav5-4A0A075B652 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav5-4A0A075B652 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav5-4A0A075B652 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Trav5-4A0A075B652 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC11.02□□□□□ -0.64
Trav5-4A0A075B652 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Trav5-4A0A075B652 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC11.02□□□□□ -0.64
Trav5-4A0A075B652 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav5-4A0A075B652 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav5-4A0A075B652 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav5-4A0A075B652 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav5-4A0A075B652 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Trav5-4A0A075B652 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC11.02□□□□□ -0.64
Trav5-4A0A075B652 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav5-4A0A075B652 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Trav5-4A0A075B652 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.02□□□□□ -0.65
Trav5-4A0A075B652 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav5-4A0A075B652 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav5-4A0A075B652 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav5-4A0A075B652 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Trav5-4A0A075B652 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav5-4A0A075B652 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav5-4A0A075B652 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav5-4A0A075B652 Mir874-201ENSMUST00000104769 76 ntBASIC11.02□□□□□ -0.65
Trav5-4A0A075B652 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC11.02□□□□□ -0.65
Trav5-4A0A075B652 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav5-4A0A075B652 Gm12485-201ENSMUST00000119641 291 ntBASIC11.02□□□□□ -0.65
Trav5-4A0A075B652 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC11.02□□□□□ -0.65
Trav5-4A0A075B652 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC11.02□□□□□ -0.65
Trav5-4A0A075B652 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav5-4A0A075B652 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav5-4A0A075B652 Gm25927-201ENSMUST00000175058 117 ntBASIC11.02□□□□□ -0.65
Trav5-4A0A075B652 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Trav5-4A0A075B652 Gm21854-201ENSMUST00000179901 471 ntBASIC11.02□□□□□ -0.65
Trav5-4A0A075B652 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav5-4A0A075B652 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Trav5-4A0A075B652 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Trav5-4A0A075B652 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav5-4A0A075B652 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav5-4A0A075B652 Gm9797-201ENSMUST00000052902 613 ntBASIC11.02□□□□□ -0.65
Trav5-4A0A075B652 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC11.02□□□□□ -0.65
Trav5-4A0A075B652 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav5-4A0A075B652 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav5-4A0A075B652 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav5-4A0A075B652 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav5-4A0A075B652 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav5-4A0A075B652 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Trav5-4A0A075B652 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav5-4A0A075B652 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav5-4A0A075B652 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.02□□□□□ -0.65
Trav5-4A0A075B652 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav5-4A0A075B652 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav5-4A0A075B652 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.02□□□□□ -0.65
Trav5-4A0A075B652 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav5-4A0A075B652 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Trav5-4A0A075B652 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav5-4A0A075B652 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav5-4A0A075B652 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav5-4A0A075B652 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav5-4A0A075B652 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav5-4A0A075B652 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
Trav5-4A0A075B652 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav5-4A0A075B652 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav5-4A0A075B652 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav5-4A0A075B652 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Trav5-4A0A075B652 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav5-4A0A075B652 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav5-4A0A075B652 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav5-4A0A075B652 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav5-4A0A075B652 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav5-4A0A075B652 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Trav5-4A0A075B652 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav5-4A0A075B652 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.01□□□□□ -0.65
Trav5-4A0A075B652 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.01□□□□□ -0.65
Trav5-4A0A075B652 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav5-4A0A075B652 Gm15678-201ENSMUST00000117573 960 ntBASIC11.01□□□□□ -0.65
Trav5-4A0A075B652 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC11.01□□□□□ -0.65
Trav5-4A0A075B652 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav5-4A0A075B652 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms