Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cldn9Q9Z0S7 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cldn9Q9Z0S7 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cldn9Q9Z0S7 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cldn9Q9Z0S7 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cldn9Q9Z0S7 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cldn9Q9Z0S7 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cldn9Q9Z0S7 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cldn9Q9Z0S7 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.65□□□□□ -0.38
Cldn9Q9Z0S7 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cldn9Q9Z0S7 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.65□□□□□ -0.38
Cldn9Q9Z0S7 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cldn9Q9Z0S7 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cldn9Q9Z0S7 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Cldn9Q9Z0S7 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cldn9Q9Z0S7 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Cldn9Q9Z0S7 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.65□□□□□ -0.38
Cldn9Q9Z0S7 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Cldn9Q9Z0S7 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.65□□□□□ -0.38
Cldn9Q9Z0S7 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.65□□□□□ -0.38
Cldn9Q9Z0S7 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cldn9Q9Z0S7 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cldn9Q9Z0S7 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cldn9Q9Z0S7 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Cldn9Q9Z0S7 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.65□□□□□ -0.38
Cldn9Q9Z0S7 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cldn9Q9Z0S7 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.65□□□□□ -0.38
Cldn9Q9Z0S7 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Cldn9Q9Z0S7 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cldn9Q9Z0S7 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.65□□□□□ -0.38
Cldn9Q9Z0S7 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cldn9Q9Z0S7 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.65□□□□□ -0.38
Cldn9Q9Z0S7 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cldn9Q9Z0S7 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cldn9Q9Z0S7 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Cldn9Q9Z0S7 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cldn9Q9Z0S7 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.64□□□□□ -0.39
Cldn9Q9Z0S7 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Cldn9Q9Z0S7 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.64□□□□□ -0.39
Cldn9Q9Z0S7 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.64□□□□□ -0.39
Cldn9Q9Z0S7 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Cldn9Q9Z0S7 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldn9Q9Z0S7 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.64□□□□□ -0.39
Cldn9Q9Z0S7 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldn9Q9Z0S7 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldn9Q9Z0S7 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.64□□□□□ -0.39
Cldn9Q9Z0S7 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldn9Q9Z0S7 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.64□□□□□ -0.39
Cldn9Q9Z0S7 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldn9Q9Z0S7 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldn9Q9Z0S7 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldn9Q9Z0S7 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cldn9Q9Z0S7 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cldn9Q9Z0S7 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.64□□□□□ -0.39
Cldn9Q9Z0S7 Gm5687-201ENSMUST00000118252 640 ntBASIC12.64□□□□□ -0.39
Cldn9Q9Z0S7 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC12.64□□□□□ -0.39
Cldn9Q9Z0S7 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.64□□□□□ -0.39
Cldn9Q9Z0S7 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cldn9Q9Z0S7 Gm45668-201ENSMUST00000211271 493 ntBASIC12.64□□□□□ -0.39
Cldn9Q9Z0S7 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldn9Q9Z0S7 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Cldn9Q9Z0S7 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Cldn9Q9Z0S7 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.64□□□□□ -0.39
Cldn9Q9Z0S7 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.64□□□□□ -0.39
Cldn9Q9Z0S7 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldn9Q9Z0S7 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldn9Q9Z0S7 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldn9Q9Z0S7 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldn9Q9Z0S7 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cldn9Q9Z0S7 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cldn9Q9Z0S7 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cldn9Q9Z0S7 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.63□□□□□ -0.39
Cldn9Q9Z0S7 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Cldn9Q9Z0S7 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cldn9Q9Z0S7 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cldn9Q9Z0S7 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cldn9Q9Z0S7 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Cldn9Q9Z0S7 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cldn9Q9Z0S7 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Cldn9Q9Z0S7 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.63□□□□□ -0.39
Cldn9Q9Z0S7 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Cldn9Q9Z0S7 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.63□□□□□ -0.39
Cldn9Q9Z0S7 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.63□□□□□ -0.39
Cldn9Q9Z0S7 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC12.63□□□□□ -0.39
Cldn9Q9Z0S7 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cldn9Q9Z0S7 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.63□□□□□ -0.39
Cldn9Q9Z0S7 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Cldn9Q9Z0S7 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cldn9Q9Z0S7 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.63□□□□□ -0.39
Cldn9Q9Z0S7 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.63□□□□□ -0.39
Cldn9Q9Z0S7 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cldn9Q9Z0S7 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cldn9Q9Z0S7 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cldn9Q9Z0S7 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cldn9Q9Z0S7 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cldn9Q9Z0S7 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cldn9Q9Z0S7 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Cldn9Q9Z0S7 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cldn9Q9Z0S7 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Cldn9Q9Z0S7 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms