Protein–RNA interactions for Protein: Q9Z0S4

Cldn13, Claudin-13, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn13Q9Z0S4 AC132467.2-202ENSMUST00000227726 559 ntBASIC11.75□□□□□ -0.53
Cldn13Q9Z0S4 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Cldn13Q9Z0S4 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC11.75□□□□□ -0.53
Cldn13Q9Z0S4 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Cldn13Q9Z0S4 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cldn13Q9Z0S4 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Cldn13Q9Z0S4 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC11.75□□□□□ -0.53
Cldn13Q9Z0S4 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cldn13Q9Z0S4 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cldn13Q9Z0S4 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cldn13Q9Z0S4 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cldn13Q9Z0S4 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cldn13Q9Z0S4 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cldn13Q9Z0S4 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Cldn13Q9Z0S4 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cldn13Q9Z0S4 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cldn13Q9Z0S4 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cldn13Q9Z0S4 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cldn13Q9Z0S4 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cldn13Q9Z0S4 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cldn13Q9Z0S4 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cldn13Q9Z0S4 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cldn13Q9Z0S4 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cldn13Q9Z0S4 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cldn13Q9Z0S4 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cldn13Q9Z0S4 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cldn13Q9Z0S4 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cldn13Q9Z0S4 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC11.74□□□□□ -0.53
Cldn13Q9Z0S4 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cldn13Q9Z0S4 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cldn13Q9Z0S4 Mir692-1-201ENSMUST00000102263 109 ntBASIC11.74□□□□□ -0.53
Cldn13Q9Z0S4 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC11.74□□□□□ -0.53
Cldn13Q9Z0S4 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cldn13Q9Z0S4 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cldn13Q9Z0S4 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cldn13Q9Z0S4 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cldn13Q9Z0S4 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cldn13Q9Z0S4 Gm9002-201ENSMUST00000178437 499 ntBASIC11.74□□□□□ -0.53
Cldn13Q9Z0S4 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC11.74□□□□□ -0.53
Cldn13Q9Z0S4 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cldn13Q9Z0S4 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cldn13Q9Z0S4 Gm38223-201ENSMUST00000194484 695 ntBASIC11.74□□□□□ -0.53
Cldn13Q9Z0S4 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC11.74□□□□□ -0.53
Cldn13Q9Z0S4 Gm8463-201ENSMUST00000208573 613 ntBASIC11.74□□□□□ -0.53
Cldn13Q9Z0S4 Gm17330-201ENSMUST00000221047 165 ntBASIC11.74□□□□□ -0.53
Cldn13Q9Z0S4 AC130829.1-201ENSMUST00000221548 494 ntBASIC11.74□□□□□ -0.53
Cldn13Q9Z0S4 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cldn13Q9Z0S4 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cldn13Q9Z0S4 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC11.74□□□□□ -0.53
Cldn13Q9Z0S4 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Cldn13Q9Z0S4 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cldn13Q9Z0S4 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC11.74□□□□□ -0.53
Cldn13Q9Z0S4 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cldn13Q9Z0S4 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC11.74□□□□□ -0.53
Cldn13Q9Z0S4 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cldn13Q9Z0S4 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cldn13Q9Z0S4 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cldn13Q9Z0S4 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cldn13Q9Z0S4 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cldn13Q9Z0S4 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cldn13Q9Z0S4 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cldn13Q9Z0S4 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC11.74□□□□□ -0.53
Cldn13Q9Z0S4 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Cldn13Q9Z0S4 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cldn13Q9Z0S4 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cldn13Q9Z0S4 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cldn13Q9Z0S4 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cldn13Q9Z0S4 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cldn13Q9Z0S4 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cldn13Q9Z0S4 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cldn13Q9Z0S4 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cldn13Q9Z0S4 Gm15371-201ENSMUST00000117057 784 ntBASIC11.73□□□□□ -0.53
Cldn13Q9Z0S4 Gm12928-201ENSMUST00000117115 573 ntBASIC11.73□□□□□ -0.53
Cldn13Q9Z0S4 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Cldn13Q9Z0S4 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cldn13Q9Z0S4 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC11.73□□□□□ -0.53
Cldn13Q9Z0S4 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cldn13Q9Z0S4 Mir7221-201ENSMUST00000184009 72 ntBASIC11.73□□□□□ -0.53
Cldn13Q9Z0S4 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cldn13Q9Z0S4 Gm42550-201ENSMUST00000201553 960 ntBASIC11.73□□□□□ -0.53
Cldn13Q9Z0S4 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cldn13Q9Z0S4 Gm45841-201ENSMUST00000207700 164 ntBASIC11.73□□□□□ -0.53
Cldn13Q9Z0S4 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC11.73□□□□□ -0.53
Cldn13Q9Z0S4 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC11.73□□□□□ -0.53
Cldn13Q9Z0S4 AL645783.1-201ENSMUST00000221416 1832 ntBASIC11.73□□□□□ -0.53
Cldn13Q9Z0S4 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cldn13Q9Z0S4 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cldn13Q9Z0S4 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cldn13Q9Z0S4 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cldn13Q9Z0S4 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cldn13Q9Z0S4 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cldn13Q9Z0S4 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cldn13Q9Z0S4 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cldn13Q9Z0S4 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cldn13Q9Z0S4 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cldn13Q9Z0S4 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC11.73□□□□□ -0.53
Cldn13Q9Z0S4 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cldn13Q9Z0S4 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cldn13Q9Z0S4 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Cldn13Q9Z0S4 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms