Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcb1Q9Z0H3 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Smarcb1Q9Z0H3 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.61□□□□□ -0.23
Smarcb1Q9Z0H3 Gm12241-201ENSMUST00000118330 726 ntBASIC13.61□□□□□ -0.23
Smarcb1Q9Z0H3 Gm9431-201ENSMUST00000119765 1051 ntBASIC13.61□□□□□ -0.23
Smarcb1Q9Z0H3 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC13.61□□□□□ -0.23
Smarcb1Q9Z0H3 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC13.61□□□□□ -0.23
Smarcb1Q9Z0H3 Mospd4-201ENSMUST00000180618 576 ntBASIC13.61□□□□□ -0.23
Smarcb1Q9Z0H3 Gm9061-201ENSMUST00000182707 1006 ntBASIC13.61□□□□□ -0.23
Smarcb1Q9Z0H3 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC13.61□□□□□ -0.23
Smarcb1Q9Z0H3 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcb1Q9Z0H3 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcb1Q9Z0H3 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcb1Q9Z0H3 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcb1Q9Z0H3 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Smarcb1Q9Z0H3 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcb1Q9Z0H3 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcb1Q9Z0H3 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcb1Q9Z0H3 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcb1Q9Z0H3 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcb1Q9Z0H3 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Smarcb1Q9Z0H3 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcb1Q9Z0H3 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.6□□□□□ -0.23
Smarcb1Q9Z0H3 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcb1Q9Z0H3 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcb1Q9Z0H3 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcb1Q9Z0H3 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcb1Q9Z0H3 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcb1Q9Z0H3 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcb1Q9Z0H3 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcb1Q9Z0H3 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Smarcb1Q9Z0H3 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC13.6□□□□□ -0.23
Smarcb1Q9Z0H3 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC13.6□□□□□ -0.23
Smarcb1Q9Z0H3 Gm44364-201ENSMUST00000198368 141 ntBASIC13.6□□□□□ -0.23
Smarcb1Q9Z0H3 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC13.6□□□□□ -0.23
Smarcb1Q9Z0H3 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC13.6□□□□□ -0.23
Smarcb1Q9Z0H3 Gm7046-201ENSMUST00000221351 977 ntBASIC13.6□□□□□ -0.23
Smarcb1Q9Z0H3 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.6□□□□□ -0.23
Smarcb1Q9Z0H3 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcb1Q9Z0H3 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcb1Q9Z0H3 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Smarcb1Q9Z0H3 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Smarcb1Q9Z0H3 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Smarcb1Q9Z0H3 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Smarcb1Q9Z0H3 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcb1Q9Z0H3 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcb1Q9Z0H3 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcb1Q9Z0H3 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcb1Q9Z0H3 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcb1Q9Z0H3 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcb1Q9Z0H3 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcb1Q9Z0H3 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcb1Q9Z0H3 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcb1Q9Z0H3 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Smarcb1Q9Z0H3 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcb1Q9Z0H3 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcb1Q9Z0H3 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcb1Q9Z0H3 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.59□□□□□ -0.23
Smarcb1Q9Z0H3 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcb1Q9Z0H3 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcb1Q9Z0H3 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Smarcb1Q9Z0H3 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcb1Q9Z0H3 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Smarcb1Q9Z0H3 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Smarcb1Q9Z0H3 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcb1Q9Z0H3 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC13.59□□□□□ -0.23
Smarcb1Q9Z0H3 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcb1Q9Z0H3 Gm14723-201ENSMUST00000118686 215 ntBASIC13.59□□□□□ -0.23
Smarcb1Q9Z0H3 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC13.59□□□□□ -0.23
Smarcb1Q9Z0H3 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcb1Q9Z0H3 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC13.59□□□□□ -0.23
Smarcb1Q9Z0H3 Gm43822-201ENSMUST00000200285 476 ntBASIC13.59□□□□□ -0.23
Smarcb1Q9Z0H3 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC13.59□□□□□ -0.23
Smarcb1Q9Z0H3 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC13.59□□□□□ -0.23
Smarcb1Q9Z0H3 Gm32025-201ENSMUST00000217960 307 ntBASIC13.59□□□□□ -0.23
Smarcb1Q9Z0H3 Gm45930-201ENSMUST00000221330 292 ntBASIC13.59□□□□□ -0.23
Smarcb1Q9Z0H3 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcb1Q9Z0H3 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcb1Q9Z0H3 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcb1Q9Z0H3 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcb1Q9Z0H3 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcb1Q9Z0H3 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcb1Q9Z0H3 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcb1Q9Z0H3 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcb1Q9Z0H3 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcb1Q9Z0H3 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcb1Q9Z0H3 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.59□□□□□ -0.23
Smarcb1Q9Z0H3 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Smarcb1Q9Z0H3 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.59□□□□□ -0.23
Smarcb1Q9Z0H3 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcb1Q9Z0H3 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcb1Q9Z0H3 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcb1Q9Z0H3 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcb1Q9Z0H3 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Smarcb1Q9Z0H3 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Smarcb1Q9Z0H3 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Smarcb1Q9Z0H3 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Smarcb1Q9Z0H3 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Smarcb1Q9Z0H3 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Smarcb1Q9Z0H3 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms