Protein–RNA interactions for Protein: Q9WV55

Vapa, Vesicle-associated membrane protein-associated protein A, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VapaQ9WV55 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VapaQ9WV55 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VapaQ9WV55 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VapaQ9WV55 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VapaQ9WV55 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VapaQ9WV55 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
VapaQ9WV55 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
VapaQ9WV55 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VapaQ9WV55 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.53□□□□□ -0.4
VapaQ9WV55 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.53□□□□□ -0.4
VapaQ9WV55 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VapaQ9WV55 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VapaQ9WV55 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
VapaQ9WV55 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.53□□□□□ -0.4
VapaQ9WV55 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
VapaQ9WV55 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
VapaQ9WV55 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VapaQ9WV55 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
VapaQ9WV55 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VapaQ9WV55 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VapaQ9WV55 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
VapaQ9WV55 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VapaQ9WV55 Gm6447-201ENSMUST00000118905 835 ntBASIC12.53□□□□□ -0.4
VapaQ9WV55 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VapaQ9WV55 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.53□□□□□ -0.4
VapaQ9WV55 Mir6956-201ENSMUST00000183598 62 ntBASIC12.53□□□□□ -0.4
VapaQ9WV55 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VapaQ9WV55 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC12.53□□□□□ -0.4
VapaQ9WV55 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.53□□□□□ -0.4
VapaQ9WV55 Hist1h2al-201ENSMUST00000091708 339 ntBASIC12.53□□□□□ -0.4
VapaQ9WV55 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
VapaQ9WV55 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VapaQ9WV55 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VapaQ9WV55 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VapaQ9WV55 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
VapaQ9WV55 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
VapaQ9WV55 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
VapaQ9WV55 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
VapaQ9WV55 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VapaQ9WV55 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.53□□□□□ -0.4
VapaQ9WV55 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.53□□□□□ -0.4
VapaQ9WV55 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VapaQ9WV55 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VapaQ9WV55 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
VapaQ9WV55 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VapaQ9WV55 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
VapaQ9WV55 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VapaQ9WV55 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VapaQ9WV55 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
VapaQ9WV55 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VapaQ9WV55 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
VapaQ9WV55 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
VapaQ9WV55 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
VapaQ9WV55 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
VapaQ9WV55 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
VapaQ9WV55 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
VapaQ9WV55 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
VapaQ9WV55 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.52□□□□□ -0.4
VapaQ9WV55 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
VapaQ9WV55 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
VapaQ9WV55 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
VapaQ9WV55 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
VapaQ9WV55 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VapaQ9WV55 Gm22189-201ENSMUST00000103822 86 ntBASIC12.52□□□□□ -0.41
VapaQ9WV55 Gm15321-201ENSMUST00000121290 288 ntBASIC12.52□□□□□ -0.41
VapaQ9WV55 Gm14719-201ENSMUST00000121891 340 ntBASIC12.52□□□□□ -0.41
VapaQ9WV55 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.52□□□□□ -0.41
VapaQ9WV55 Gm24694-201ENSMUST00000180054 110 ntBASIC12.52□□□□□ -0.41
VapaQ9WV55 Mir7684-201ENSMUST00000183858 60 ntBASIC12.52□□□□□ -0.41
VapaQ9WV55 Gm27663-201ENSMUST00000184839 110 ntBASIC12.52□□□□□ -0.41
VapaQ9WV55 Gm28760-201ENSMUST00000185995 736 ntBASIC12.52□□□□□ -0.41
VapaQ9WV55 Gm42550-201ENSMUST00000201553 960 ntBASIC12.52□□□□□ -0.41
VapaQ9WV55 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC12.52□□□□□ -0.41
VapaQ9WV55 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VapaQ9WV55 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VapaQ9WV55 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
VapaQ9WV55 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
VapaQ9WV55 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.52□□□□□ -0.41
VapaQ9WV55 Gm26315-201ENSMUST00000083890 321 ntBASIC12.52□□□□□ -0.41
VapaQ9WV55 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VapaQ9WV55 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
VapaQ9WV55 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VapaQ9WV55 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VapaQ9WV55 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VapaQ9WV55 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VapaQ9WV55 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VapaQ9WV55 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VapaQ9WV55 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
VapaQ9WV55 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.52□□□□□ -0.41
VapaQ9WV55 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VapaQ9WV55 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.52□□□□□ -0.41
VapaQ9WV55 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
VapaQ9WV55 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
VapaQ9WV55 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VapaQ9WV55 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
VapaQ9WV55 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.51□□□□□ -0.41
VapaQ9WV55 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
VapaQ9WV55 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
VapaQ9WV55 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VapaQ9WV55 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms