Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sec61a2Q9JLR1 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sec61a2Q9JLR1 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sec61a2Q9JLR1 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
Sec61a2Q9JLR1 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sec61a2Q9JLR1 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sec61a2Q9JLR1 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC11.87□□□□□ -0.51
Sec61a2Q9JLR1 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Sec61a2Q9JLR1 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC11.87□□□□□ -0.51
Sec61a2Q9JLR1 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sec61a2Q9JLR1 AC117194.1-201ENSMUST00000224847 3002 ntBASIC11.87□□□□□ -0.51
Sec61a2Q9JLR1 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sec61a2Q9JLR1 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sec61a2Q9JLR1 AC154527.2-201ENSMUST00000225256 1466 ntBASIC11.87□□□□□ -0.51
Sec61a2Q9JLR1 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sec61a2Q9JLR1 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sec61a2Q9JLR1 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sec61a2Q9JLR1 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sec61a2Q9JLR1 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sec61a2Q9JLR1 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sec61a2Q9JLR1 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Sec61a2Q9JLR1 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sec61a2Q9JLR1 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sec61a2Q9JLR1 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sec61a2Q9JLR1 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sec61a2Q9JLR1 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sec61a2Q9JLR1 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sec61a2Q9JLR1 Gm43273-201ENSMUST00000199649 2594 ntBASIC11.86□□□□□ -0.51
Sec61a2Q9JLR1 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sec61a2Q9JLR1 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sec61a2Q9JLR1 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sec61a2Q9JLR1 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Sec61a2Q9JLR1 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sec61a2Q9JLR1 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sec61a2Q9JLR1 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
Sec61a2Q9JLR1 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sec61a2Q9JLR1 Gm12341-201ENSMUST00000119724 503 ntBASIC11.86□□□□□ -0.51
Sec61a2Q9JLR1 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC11.86□□□□□ -0.51
Sec61a2Q9JLR1 Gm12138-201ENSMUST00000122180 951 ntBASIC11.86□□□□□ -0.51
Sec61a2Q9JLR1 Gm15376-201ENSMUST00000122258 783 ntBASIC11.86□□□□□ -0.51
Sec61a2Q9JLR1 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC11.86□□□□□ -0.51
Sec61a2Q9JLR1 Gm12091-201ENSMUST00000146791 830 ntBASIC11.86□□□□□ -0.51
Sec61a2Q9JLR1 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC11.86□□□□□ -0.51
Sec61a2Q9JLR1 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sec61a2Q9JLR1 Gm5354-201ENSMUST00000182417 973 ntBASIC11.86□□□□□ -0.51
Sec61a2Q9JLR1 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC11.86□□□□□ -0.51
Sec61a2Q9JLR1 Gm6745-201ENSMUST00000199216 526 ntBASIC11.86□□□□□ -0.51
Sec61a2Q9JLR1 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC11.86□□□□□ -0.51
Sec61a2Q9JLR1 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Sec61a2Q9JLR1 Gm45668-201ENSMUST00000211271 493 ntBASIC11.86□□□□□ -0.51
Sec61a2Q9JLR1 AC155258.1-201ENSMUST00000219303 253 ntBASIC11.86□□□□□ -0.51
Sec61a2Q9JLR1 AC238811.3-201ENSMUST00000225422 709 ntBASIC11.86□□□□□ -0.51
Sec61a2Q9JLR1 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC11.86□□□□□ -0.51
Sec61a2Q9JLR1 Gm13730-201ENSMUST00000121036 1462 ntBASIC11.86□□□□□ -0.51
Sec61a2Q9JLR1 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sec61a2Q9JLR1 Gm7899-201ENSMUST00000192935 1897 ntBASIC11.86□□□□□ -0.51
Sec61a2Q9JLR1 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Sec61a2Q9JLR1 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sec61a2Q9JLR1 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sec61a2Q9JLR1 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sec61a2Q9JLR1 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sec61a2Q9JLR1 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sec61a2Q9JLR1 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sec61a2Q9JLR1 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sec61a2Q9JLR1 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sec61a2Q9JLR1 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sec61a2Q9JLR1 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sec61a2Q9JLR1 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Sec61a2Q9JLR1 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sec61a2Q9JLR1 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sec61a2Q9JLR1 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sec61a2Q9JLR1 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Sec61a2Q9JLR1 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sec61a2Q9JLR1 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
Sec61a2Q9JLR1 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sec61a2Q9JLR1 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Sec61a2Q9JLR1 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Sec61a2Q9JLR1 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sec61a2Q9JLR1 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sec61a2Q9JLR1 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sec61a2Q9JLR1 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sec61a2Q9JLR1 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sec61a2Q9JLR1 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sec61a2Q9JLR1 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sec61a2Q9JLR1 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sec61a2Q9JLR1 Gm11524-201ENSMUST00000119349 807 ntBASIC11.85□□□□□ -0.51
Sec61a2Q9JLR1 Gm11424-201ENSMUST00000121929 829 ntBASIC11.85□□□□□ -0.51
Sec61a2Q9JLR1 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC11.85□□□□□ -0.51
Sec61a2Q9JLR1 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sec61a2Q9JLR1 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC11.85□□□□□ -0.51
Sec61a2Q9JLR1 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sec61a2Q9JLR1 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC11.85□□□□□ -0.51
Sec61a2Q9JLR1 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC11.85□□□□□ -0.51
Sec61a2Q9JLR1 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Sec61a2Q9JLR1 Mir6392-201ENSMUST00000184924 108 ntBASIC11.85□□□□□ -0.51
Sec61a2Q9JLR1 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC11.85□□□□□ -0.51
Sec61a2Q9JLR1 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sec61a2Q9JLR1 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC11.85□□□□□ -0.51
Sec61a2Q9JLR1 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sec61a2Q9JLR1 Gm15823-201ENSMUST00000064305 670 ntBASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms