Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trem1Q9JKE2 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trem1Q9JKE2 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trem1Q9JKE2 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trem1Q9JKE2 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trem1Q9JKE2 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trem1Q9JKE2 AC126549.2-201ENSMUST00000223997 1976 ntBASIC11.76□□□□□ -0.53
Trem1Q9JKE2 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trem1Q9JKE2 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trem1Q9JKE2 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trem1Q9JKE2 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC11.76□□□□□ -0.53
Trem1Q9JKE2 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC11.76□□□□□ -0.53
Trem1Q9JKE2 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC11.76□□□□□ -0.53
Trem1Q9JKE2 Gm15483-201ENSMUST00000120338 456 ntBASIC11.76□□□□□ -0.53
Trem1Q9JKE2 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC11.76□□□□□ -0.53
Trem1Q9JKE2 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC11.76□□□□□ -0.53
Trem1Q9JKE2 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC11.76□□□□□ -0.53
Trem1Q9JKE2 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC11.76□□□□□ -0.53
Trem1Q9JKE2 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC11.76□□□□□ -0.53
Trem1Q9JKE2 Gm10829-201ENSMUST00000202084 2988 ntBASIC11.76□□□□□ -0.53
Trem1Q9JKE2 Klk2-ps-201ENSMUST00000205342 571 ntBASIC11.76□□□□□ -0.53
Trem1Q9JKE2 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC11.76□□□□□ -0.53
Trem1Q9JKE2 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC11.76□□□□□ -0.53
Trem1Q9JKE2 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trem1Q9JKE2 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trem1Q9JKE2 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trem1Q9JKE2 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trem1Q9JKE2 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trem1Q9JKE2 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Trem1Q9JKE2 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC11.76□□□□□ -0.53
Trem1Q9JKE2 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trem1Q9JKE2 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trem1Q9JKE2 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trem1Q9JKE2 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trem1Q9JKE2 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trem1Q9JKE2 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trem1Q9JKE2 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trem1Q9JKE2 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trem1Q9JKE2 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trem1Q9JKE2 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC11.76□□□□□ -0.53
Trem1Q9JKE2 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trem1Q9JKE2 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trem1Q9JKE2 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trem1Q9JKE2 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trem1Q9JKE2 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trem1Q9JKE2 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trem1Q9JKE2 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trem1Q9JKE2 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trem1Q9JKE2 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trem1Q9JKE2 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trem1Q9JKE2 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trem1Q9JKE2 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trem1Q9JKE2 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trem1Q9JKE2 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trem1Q9JKE2 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trem1Q9JKE2 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trem1Q9JKE2 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC11.75□□□□□ -0.53
Trem1Q9JKE2 Gm27628-201ENSMUST00000184911 107 ntBASIC11.75□□□□□ -0.53
Trem1Q9JKE2 Gm10060-201ENSMUST00000212002 111 ntBASIC11.75□□□□□ -0.53
Trem1Q9JKE2 Gm45747-201ENSMUST00000212203 999 ntBASIC11.75□□□□□ -0.53
Trem1Q9JKE2 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trem1Q9JKE2 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trem1Q9JKE2 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trem1Q9JKE2 Gm15590-201ENSMUST00000078419 552 ntBASIC11.75□□□□□ -0.53
Trem1Q9JKE2 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trem1Q9JKE2 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trem1Q9JKE2 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trem1Q9JKE2 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Trem1Q9JKE2 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trem1Q9JKE2 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trem1Q9JKE2 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trem1Q9JKE2 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trem1Q9JKE2 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trem1Q9JKE2 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trem1Q9JKE2 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trem1Q9JKE2 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trem1Q9JKE2 Gm9347-201ENSMUST00000211473 1607 ntBASIC11.75□□□□□ -0.53
Trem1Q9JKE2 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trem1Q9JKE2 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trem1Q9JKE2 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trem1Q9JKE2 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trem1Q9JKE2 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trem1Q9JKE2 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trem1Q9JKE2 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trem1Q9JKE2 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trem1Q9JKE2 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trem1Q9JKE2 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trem1Q9JKE2 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trem1Q9JKE2 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trem1Q9JKE2 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trem1Q9JKE2 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trem1Q9JKE2 Gm9385-201ENSMUST00000117563 472 ntBASIC11.74□□□□□ -0.53
Trem1Q9JKE2 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trem1Q9JKE2 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC11.74□□□□□ -0.53
Trem1Q9JKE2 Gm10275-202ENSMUST00000168697 495 ntBASIC11.74□□□□□ -0.53
Trem1Q9JKE2 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC11.74□□□□□ -0.53
Trem1Q9JKE2 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trem1Q9JKE2 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trem1Q9JKE2 Gm10275-201ENSMUST00000092620 635 ntBASIC11.74□□□□□ -0.53
Trem1Q9JKE2 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms