Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ube4bQ9ES00 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ube4bQ9ES00 Mir874-201ENSMUST00000104769 76 ntBASIC12.61□□□□□ -0.39
Ube4bQ9ES00 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC12.61□□□□□ -0.39
Ube4bQ9ES00 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC12.61□□□□□ -0.39
Ube4bQ9ES00 Gm4913-201ENSMUST00000117075 1290 ntBASIC12.61□□□□□ -0.39
Ube4bQ9ES00 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Ube4bQ9ES00 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC12.61□□□□□ -0.39
Ube4bQ9ES00 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ube4bQ9ES00 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ube4bQ9ES00 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC12.61□□□□□ -0.39
Ube4bQ9ES00 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC12.61□□□□□ -0.39
Ube4bQ9ES00 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC12.61□□□□□ -0.39
Ube4bQ9ES00 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ube4bQ9ES00 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC12.61□□□□□ -0.39
Ube4bQ9ES00 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Ube4bQ9ES00 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ube4bQ9ES00 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ube4bQ9ES00 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ube4bQ9ES00 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ube4bQ9ES00 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ube4bQ9ES00 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ube4bQ9ES00 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ube4bQ9ES00 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ube4bQ9ES00 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Ube4bQ9ES00 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ube4bQ9ES00 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ube4bQ9ES00 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ube4bQ9ES00 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ube4bQ9ES00 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ube4bQ9ES00 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Ube4bQ9ES00 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ube4bQ9ES00 Daam2-202ENSMUST00000224595 1926 ntBASIC12.6□□□□□ -0.39
Ube4bQ9ES00 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ube4bQ9ES00 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ube4bQ9ES00 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ube4bQ9ES00 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ube4bQ9ES00 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ube4bQ9ES00 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ube4bQ9ES00 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ube4bQ9ES00 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ube4bQ9ES00 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Ube4bQ9ES00 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.6□□□□□ -0.39
Ube4bQ9ES00 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ube4bQ9ES00 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Ube4bQ9ES00 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ube4bQ9ES00 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ube4bQ9ES00 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ube4bQ9ES00 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ube4bQ9ES00 Gm2810-201ENSMUST00000118681 990 ntBASIC12.6□□□□□ -0.39
Ube4bQ9ES00 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ube4bQ9ES00 Rprl2-201ENSMUST00000157150 290 ntBASIC12.6□□□□□ -0.39
Ube4bQ9ES00 Gm5628-201ENSMUST00000222318 1049 ntBASIC12.6□□□□□ -0.39
Ube4bQ9ES00 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC12.6□□□□□ -0.39
Ube4bQ9ES00 Ndufaf2-202ENSMUST00000223734 556 ntBASIC12.6□□□□□ -0.39
Ube4bQ9ES00 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ube4bQ9ES00 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ube4bQ9ES00 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Ube4bQ9ES00 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Ube4bQ9ES00 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ube4bQ9ES00 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ube4bQ9ES00 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.6□□□□□ -0.39
Ube4bQ9ES00 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ube4bQ9ES00 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ube4bQ9ES00 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ube4bQ9ES00 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ube4bQ9ES00 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ube4bQ9ES00 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.6□□□□□ -0.39
Ube4bQ9ES00 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ube4bQ9ES00 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ube4bQ9ES00 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ube4bQ9ES00 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ube4bQ9ES00 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ube4bQ9ES00 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ube4bQ9ES00 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ube4bQ9ES00 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ube4bQ9ES00 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Ube4bQ9ES00 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ube4bQ9ES00 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ube4bQ9ES00 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ube4bQ9ES00 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.59□□□□□ -0.39
Ube4bQ9ES00 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Ube4bQ9ES00 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ube4bQ9ES00 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ube4bQ9ES00 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Ube4bQ9ES00 Gm6756-201ENSMUST00000180647 1620 ntBASIC12.59□□□□□ -0.39
Ube4bQ9ES00 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Ube4bQ9ES00 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ube4bQ9ES00 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Ube4bQ9ES00 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Ube4bQ9ES00 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ube4bQ9ES00 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ube4bQ9ES00 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.59□□□□□ -0.39
Ube4bQ9ES00 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ube4bQ9ES00 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Ube4bQ9ES00 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ube4bQ9ES00 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ube4bQ9ES00 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC12.59□□□□□ -0.39
Ube4bQ9ES00 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ube4bQ9ES00 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms