Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.23□□□□□ -0.45
Cdc40Q9DC48 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.23□□□□□ -0.45
Cdc40Q9DC48 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdc40Q9DC48 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdc40Q9DC48 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdc40Q9DC48 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cdc40Q9DC48 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cdc40Q9DC48 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdc40Q9DC48 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdc40Q9DC48 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdc40Q9DC48 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdc40Q9DC48 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cdc40Q9DC48 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdc40Q9DC48 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.23□□□□□ -0.45
Cdc40Q9DC48 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cdc40Q9DC48 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cdc40Q9DC48 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdc40Q9DC48 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Cdc40Q9DC48 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdc40Q9DC48 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cdc40Q9DC48 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cdc40Q9DC48 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdc40Q9DC48 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdc40Q9DC48 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdc40Q9DC48 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cdc40Q9DC48 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Cdc40Q9DC48 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdc40Q9DC48 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdc40Q9DC48 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdc40Q9DC48 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdc40Q9DC48 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cdc40Q9DC48 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Cdc40Q9DC48 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdc40Q9DC48 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdc40Q9DC48 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdc40Q9DC48 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Cdc40Q9DC48 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdc40Q9DC48 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdc40Q9DC48 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Cdc40Q9DC48 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdc40Q9DC48 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdc40Q9DC48 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cdc40Q9DC48 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdc40Q9DC48 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.22□□□□□ -0.45
Cdc40Q9DC48 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.22□□□□□ -0.45
Cdc40Q9DC48 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cdc40Q9DC48 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cdc40Q9DC48 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.22□□□□□ -0.45
Cdc40Q9DC48 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdc40Q9DC48 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Cdc40Q9DC48 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cdc40Q9DC48 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cdc40Q9DC48 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.22□□□□□ -0.45
Cdc40Q9DC48 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdc40Q9DC48 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdc40Q9DC48 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.22□□□□□ -0.45
Cdc40Q9DC48 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.22□□□□□ -0.45
Cdc40Q9DC48 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cdc40Q9DC48 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.22□□□□□ -0.45
Cdc40Q9DC48 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.22□□□□□ -0.45
Cdc40Q9DC48 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.22□□□□□ -0.45
Cdc40Q9DC48 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdc40Q9DC48 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Cdc40Q9DC48 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.22□□□□□ -0.45
Cdc40Q9DC48 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cdc40Q9DC48 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.22□□□□□ -0.45
Cdc40Q9DC48 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdc40Q9DC48 Gm6091-201ENSMUST00000098307 165 ntBASIC12.22□□□□□ -0.45
Cdc40Q9DC48 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cdc40Q9DC48 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdc40Q9DC48 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cdc40Q9DC48 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cdc40Q9DC48 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cdc40Q9DC48 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdc40Q9DC48 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdc40Q9DC48 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cdc40Q9DC48 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.22□□□□□ -0.45
Cdc40Q9DC48 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cdc40Q9DC48 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdc40Q9DC48 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cdc40Q9DC48 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdc40Q9DC48 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Cdc40Q9DC48 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdc40Q9DC48 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdc40Q9DC48 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cdc40Q9DC48 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdc40Q9DC48 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Cdc40Q9DC48 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdc40Q9DC48 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Cdc40Q9DC48 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdc40Q9DC48 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdc40Q9DC48 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdc40Q9DC48 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.21□□□□□ -0.45
Cdc40Q9DC48 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdc40Q9DC48 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.21□□□□□ -0.45
Cdc40Q9DC48 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cdc40Q9DC48 Gm38144-201ENSMUST00000192790 465 ntBASIC12.21□□□□□ -0.45
Cdc40Q9DC48 Gm44397-201ENSMUST00000195950 113 ntBASIC12.21□□□□□ -0.45
Cdc40Q9DC48 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.21□□□□□ -0.45
Cdc40Q9DC48 Gm6007-201ENSMUST00000208170 823 ntBASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms