Protein–RNA interactions for Protein: Q9DA80

Rsph3b, Radial spoke head protein 3 homolog B, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph3bQ9DA80 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Rsph3bQ9DA80 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rsph3bQ9DA80 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rsph3bQ9DA80 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rsph3bQ9DA80 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC14.43□□□□□ -0.1
Rsph3bQ9DA80 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Rsph3bQ9DA80 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC14.43□□□□□ -0.1
Rsph3bQ9DA80 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC14.43□□□□□ -0.1
Rsph3bQ9DA80 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC14.43□□□□□ -0.1
Rsph3bQ9DA80 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC14.43□□□□□ -0.1
Rsph3bQ9DA80 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rsph3bQ9DA80 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rsph3bQ9DA80 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC14.43□□□□□ -0.1
Rsph3bQ9DA80 Gm17823-201ENSMUST00000217830 1006 ntBASIC14.43□□□□□ -0.1
Rsph3bQ9DA80 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rsph3bQ9DA80 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rsph3bQ9DA80 Snora73a-201ENSMUST00000082453 205 ntBASIC14.43□□□□□ -0.1
Rsph3bQ9DA80 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Rsph3bQ9DA80 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rsph3bQ9DA80 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.43□□□□□ -0.1
Rsph3bQ9DA80 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rsph3bQ9DA80 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rsph3bQ9DA80 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rsph3bQ9DA80 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rsph3bQ9DA80 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rsph3bQ9DA80 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Rsph3bQ9DA80 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rsph3bQ9DA80 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rsph3bQ9DA80 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Rsph3bQ9DA80 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rsph3bQ9DA80 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rsph3bQ9DA80 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.42□□□□□ -0.1
Rsph3bQ9DA80 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rsph3bQ9DA80 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Rsph3bQ9DA80 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC14.42□□□□□ -0.1
Rsph3bQ9DA80 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC14.42□□□□□ -0.1
Rsph3bQ9DA80 Gm26185-201ENSMUST00000157692 266 ntBASIC14.42□□□□□ -0.1
Rsph3bQ9DA80 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC14.42□□□□□ -0.1
Rsph3bQ9DA80 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC14.42□□□□□ -0.1
Rsph3bQ9DA80 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Rsph3bQ9DA80 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rsph3bQ9DA80 AC133598.1-201ENSMUST00000224327 660 ntBASIC14.42□□□□□ -0.1
Rsph3bQ9DA80 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Rsph3bQ9DA80 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rsph3bQ9DA80 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC14.42□□□□□ -0.1
Rsph3bQ9DA80 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Rsph3bQ9DA80 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rsph3bQ9DA80 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rsph3bQ9DA80 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rsph3bQ9DA80 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rsph3bQ9DA80 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rsph3bQ9DA80 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rsph3bQ9DA80 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rsph3bQ9DA80 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rsph3bQ9DA80 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Rsph3bQ9DA80 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rsph3bQ9DA80 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.42□□□□□ -0.1
Rsph3bQ9DA80 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rsph3bQ9DA80 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rsph3bQ9DA80 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC14.41□□□□□ -0.1
Rsph3bQ9DA80 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rsph3bQ9DA80 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rsph3bQ9DA80 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rsph3bQ9DA80 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC14.41□□□□□ -0.1
Rsph3bQ9DA80 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Rsph3bQ9DA80 Gm16479-201ENSMUST00000121706 932 ntBASIC14.41□□□□□ -0.1
Rsph3bQ9DA80 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC14.41□□□□□ -0.1
Rsph3bQ9DA80 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC14.41□□□□□ -0.1
Rsph3bQ9DA80 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC14.41□□□□□ -0.1
Rsph3bQ9DA80 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC14.41□□□□□ -0.1
Rsph3bQ9DA80 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Rsph3bQ9DA80 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rsph3bQ9DA80 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC14.41□□□□□ -0.1
Rsph3bQ9DA80 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rsph3bQ9DA80 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Rsph3bQ9DA80 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rsph3bQ9DA80 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rsph3bQ9DA80 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rsph3bQ9DA80 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rsph3bQ9DA80 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rsph3bQ9DA80 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rsph3bQ9DA80 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rsph3bQ9DA80 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rsph3bQ9DA80 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rsph3bQ9DA80 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Rsph3bQ9DA80 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rsph3bQ9DA80 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rsph3bQ9DA80 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rsph3bQ9DA80 Gm43423-201ENSMUST00000198390 2094 ntBASIC14.4□□□□□ -0.1
Rsph3bQ9DA80 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rsph3bQ9DA80 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rsph3bQ9DA80 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rsph3bQ9DA80 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rsph3bQ9DA80 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rsph3bQ9DA80 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rsph3bQ9DA80 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rsph3bQ9DA80 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rsph3bQ9DA80 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rsph3bQ9DA80 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC14.4□□□□□ -0.1
Rsph3bQ9DA80 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms