Protein–RNA interactions for Protein: Q9DA73

Ccdc89, Coiled-coil domain-containing protein 89, mousemouse

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc89Q9DA73 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14.41□□□□□ -0.1
Ccdc89Q9DA73 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc89Q9DA73 Gm10576-201ENSMUST00000191927 825 ntBASIC14.41□□□□□ -0.1
Ccdc89Q9DA73 Gm37917-201ENSMUST00000194711 392 ntBASIC14.41□□□□□ -0.1
Ccdc89Q9DA73 AC154687.2-201ENSMUST00000223853 640 ntBASIC14.41□□□□□ -0.1
Ccdc89Q9DA73 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc89Q9DA73 Gm2423-201ENSMUST00000074863 733 ntBASIC14.41□□□□□ -0.1
Ccdc89Q9DA73 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc89Q9DA73 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc89Q9DA73 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc89Q9DA73 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc89Q9DA73 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc89Q9DA73 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc89Q9DA73 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc89Q9DA73 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc89Q9DA73 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc89Q9DA73 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc89Q9DA73 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc89Q9DA73 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc89Q9DA73 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Ccdc89Q9DA73 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc89Q9DA73 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc89Q9DA73 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc89Q9DA73 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc89Q9DA73 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc89Q9DA73 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc89Q9DA73 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc89Q9DA73 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc89Q9DA73 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc89Q9DA73 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc89Q9DA73 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC14.4□□□□□ -0.1
Ccdc89Q9DA73 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC14.4□□□□□ -0.1
Ccdc89Q9DA73 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc89Q9DA73 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC14.4□□□□□ -0.1
Ccdc89Q9DA73 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Ccdc89Q9DA73 Gm27437-201ENSMUST00000183429 107 ntBASIC14.4□□□□□ -0.1
Ccdc89Q9DA73 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc89Q9DA73 Gm44985-201ENSMUST00000206202 1016 ntBASIC14.4□□□□□ -0.1
Ccdc89Q9DA73 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc89Q9DA73 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc89Q9DA73 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc89Q9DA73 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc89Q9DA73 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc89Q9DA73 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc89Q9DA73 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc89Q9DA73 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc89Q9DA73 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Ccdc89Q9DA73 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc89Q9DA73 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc89Q9DA73 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc89Q9DA73 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
Ccdc89Q9DA73 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Ccdc89Q9DA73 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc89Q9DA73 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc89Q9DA73 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Ccdc89Q9DA73 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc89Q9DA73 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc89Q9DA73 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Ccdc89Q9DA73 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc89Q9DA73 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc89Q9DA73 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Ccdc89Q9DA73 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc89Q9DA73 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc89Q9DA73 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc89Q9DA73 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc89Q9DA73 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc89Q9DA73 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Ccdc89Q9DA73 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc89Q9DA73 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Ccdc89Q9DA73 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc89Q9DA73 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc89Q9DA73 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc89Q9DA73 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc89Q9DA73 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc89Q9DA73 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc89Q9DA73 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Ccdc89Q9DA73 Gm7488-201ENSMUST00000117148 684 ntBASIC14.39□□□□□ -0.11
Ccdc89Q9DA73 Gm12859-201ENSMUST00000117834 427 ntBASIC14.39□□□□□ -0.11
Ccdc89Q9DA73 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC14.39□□□□□ -0.11
Ccdc89Q9DA73 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Ccdc89Q9DA73 Gm6473-201ENSMUST00000188572 1210 ntBASIC14.39□□□□□ -0.11
Ccdc89Q9DA73 Gm6983-201ENSMUST00000214912 628 ntBASIC14.39□□□□□ -0.11
Ccdc89Q9DA73 Gm18624-201ENSMUST00000220966 658 ntBASIC14.39□□□□□ -0.11
Ccdc89Q9DA73 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc89Q9DA73 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc89Q9DA73 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Ccdc89Q9DA73 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc89Q9DA73 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc89Q9DA73 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc89Q9DA73 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc89Q9DA73 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Ccdc89Q9DA73 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Ccdc89Q9DA73 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc89Q9DA73 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc89Q9DA73 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc89Q9DA73 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC14.39□□□□□ -0.11
Ccdc89Q9DA73 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc89Q9DA73 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc89Q9DA73 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc89Q9DA73 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms