Protein–RNA interactions for Protein: Q9CZB3

Thumpd2, THUMP domain-containing protein 2, mousemouse

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd2Q9CZB3 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Thumpd2Q9CZB3 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.81□□□□□ -0.2
Thumpd2Q9CZB3 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Thumpd2Q9CZB3 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Thumpd2Q9CZB3 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Thumpd2Q9CZB3 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Thumpd2Q9CZB3 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Thumpd2Q9CZB3 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Thumpd2Q9CZB3 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Thumpd2Q9CZB3 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Thumpd2Q9CZB3 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Thumpd2Q9CZB3 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Thumpd2Q9CZB3 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Thumpd2Q9CZB3 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Thumpd2Q9CZB3 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Thumpd2Q9CZB3 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Thumpd2Q9CZB3 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Thumpd2Q9CZB3 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Thumpd2Q9CZB3 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Thumpd2Q9CZB3 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.8□□□□□ -0.2
Thumpd2Q9CZB3 Gm6218-201ENSMUST00000219812 628 ntBASIC13.8□□□□□ -0.2
Thumpd2Q9CZB3 AC138604.1-201ENSMUST00000226969 739 ntBASIC13.8□□□□□ -0.2
Thumpd2Q9CZB3 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Thumpd2Q9CZB3 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Thumpd2Q9CZB3 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Thumpd2Q9CZB3 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Thumpd2Q9CZB3 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.8□□□□□ -0.2
Thumpd2Q9CZB3 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Thumpd2Q9CZB3 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Thumpd2Q9CZB3 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Thumpd2Q9CZB3 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Thumpd2Q9CZB3 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.8□□□□□ -0.2
Thumpd2Q9CZB3 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Thumpd2Q9CZB3 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.8□□□□□ -0.2
Thumpd2Q9CZB3 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Thumpd2Q9CZB3 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Thumpd2Q9CZB3 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Thumpd2Q9CZB3 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Thumpd2Q9CZB3 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Thumpd2Q9CZB3 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Thumpd2Q9CZB3 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Thumpd2Q9CZB3 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.79□□□□□ -0.2
Thumpd2Q9CZB3 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Thumpd2Q9CZB3 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Thumpd2Q9CZB3 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Thumpd2Q9CZB3 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Thumpd2Q9CZB3 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Thumpd2Q9CZB3 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Thumpd2Q9CZB3 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Thumpd2Q9CZB3 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.79□□□□□ -0.2
Thumpd2Q9CZB3 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.79□□□□□ -0.2
Thumpd2Q9CZB3 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.79□□□□□ -0.2
Thumpd2Q9CZB3 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Thumpd2Q9CZB3 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Thumpd2Q9CZB3 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Thumpd2Q9CZB3 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Thumpd2Q9CZB3 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Thumpd2Q9CZB3 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Thumpd2Q9CZB3 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Thumpd2Q9CZB3 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Thumpd2Q9CZB3 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Thumpd2Q9CZB3 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Thumpd2Q9CZB3 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.78□□□□□ -0.2
Thumpd2Q9CZB3 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Thumpd2Q9CZB3 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Thumpd2Q9CZB3 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Thumpd2Q9CZB3 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Thumpd2Q9CZB3 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.78□□□□□ -0.2
Thumpd2Q9CZB3 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Thumpd2Q9CZB3 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Thumpd2Q9CZB3 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Thumpd2Q9CZB3 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Thumpd2Q9CZB3 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Thumpd2Q9CZB3 Gm7488-201ENSMUST00000117148 684 ntBASIC13.78□□□□□ -0.2
Thumpd2Q9CZB3 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Thumpd2Q9CZB3 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.78□□□□□ -0.2
Thumpd2Q9CZB3 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.78□□□□□ -0.2
Thumpd2Q9CZB3 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Thumpd2Q9CZB3 Gm26464-201ENSMUST00000157094 305 ntBASIC13.78□□□□□ -0.2
Thumpd2Q9CZB3 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Thumpd2Q9CZB3 Gm5354-201ENSMUST00000182417 973 ntBASIC13.78□□□□□ -0.2
Thumpd2Q9CZB3 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
Thumpd2Q9CZB3 Gm43094-201ENSMUST00000196549 921 ntBASIC13.78□□□□□ -0.2
Thumpd2Q9CZB3 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Thumpd2Q9CZB3 Gm19220-201ENSMUST00000222682 803 ntBASIC13.78□□□□□ -0.2
Thumpd2Q9CZB3 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Thumpd2Q9CZB3 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.78□□□□□ -0.2
Thumpd2Q9CZB3 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Thumpd2Q9CZB3 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Thumpd2Q9CZB3 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Thumpd2Q9CZB3 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Thumpd2Q9CZB3 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.78□□□□□ -0.2
Thumpd2Q9CZB3 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Thumpd2Q9CZB3 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Thumpd2Q9CZB3 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.78□□□□□ -0.2
Thumpd2Q9CZB3 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.78□□□□□ -0.2
Thumpd2Q9CZB3 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Thumpd2Q9CZB3 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Thumpd2Q9CZB3 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.78□□□□□ -0.2
Thumpd2Q9CZB3 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms