Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hdhd3Q9CYW4 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hdhd3Q9CYW4 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hdhd3Q9CYW4 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hdhd3Q9CYW4 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Hdhd3Q9CYW4 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Hdhd3Q9CYW4 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hdhd3Q9CYW4 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC10.68□□□□□ -0.7
Hdhd3Q9CYW4 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hdhd3Q9CYW4 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Hdhd3Q9CYW4 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hdhd3Q9CYW4 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hdhd3Q9CYW4 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hdhd3Q9CYW4 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hdhd3Q9CYW4 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hdhd3Q9CYW4 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC10.67□□□□□ -0.7
Hdhd3Q9CYW4 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hdhd3Q9CYW4 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hdhd3Q9CYW4 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC10.67□□□□□ -0.7
Hdhd3Q9CYW4 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Hdhd3Q9CYW4 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Hdhd3Q9CYW4 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hdhd3Q9CYW4 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hdhd3Q9CYW4 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Hdhd3Q9CYW4 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hdhd3Q9CYW4 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Hdhd3Q9CYW4 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Hdhd3Q9CYW4 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hdhd3Q9CYW4 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hdhd3Q9CYW4 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Hdhd3Q9CYW4 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC10.67□□□□□ -0.7
Hdhd3Q9CYW4 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hdhd3Q9CYW4 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Hdhd3Q9CYW4 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC10.67□□□□□ -0.7
Hdhd3Q9CYW4 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Hdhd3Q9CYW4 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hdhd3Q9CYW4 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hdhd3Q9CYW4 Gm11779-201ENSMUST00000118541 368 ntBASIC10.67□□□□□ -0.7
Hdhd3Q9CYW4 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC10.67□□□□□ -0.7
Hdhd3Q9CYW4 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC10.67□□□□□ -0.7
Hdhd3Q9CYW4 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Hdhd3Q9CYW4 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Hdhd3Q9CYW4 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC10.67□□□□□ -0.7
Hdhd3Q9CYW4 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC10.67□□□□□ -0.7
Hdhd3Q9CYW4 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Hdhd3Q9CYW4 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hdhd3Q9CYW4 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hdhd3Q9CYW4 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hdhd3Q9CYW4 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Hdhd3Q9CYW4 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hdhd3Q9CYW4 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hdhd3Q9CYW4 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Hdhd3Q9CYW4 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hdhd3Q9CYW4 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC10.67□□□□□ -0.7
Hdhd3Q9CYW4 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Hdhd3Q9CYW4 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Hdhd3Q9CYW4 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hdhd3Q9CYW4 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hdhd3Q9CYW4 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hdhd3Q9CYW4 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hdhd3Q9CYW4 Gm13859-201ENSMUST00000119936 1423 ntBASIC10.67□□□□□ -0.7
Hdhd3Q9CYW4 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Hdhd3Q9CYW4 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hdhd3Q9CYW4 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hdhd3Q9CYW4 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hdhd3Q9CYW4 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Hdhd3Q9CYW4 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hdhd3Q9CYW4 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hdhd3Q9CYW4 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hdhd3Q9CYW4 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hdhd3Q9CYW4 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hdhd3Q9CYW4 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hdhd3Q9CYW4 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hdhd3Q9CYW4 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hdhd3Q9CYW4 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hdhd3Q9CYW4 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC10.66□□□□□ -0.7
Hdhd3Q9CYW4 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hdhd3Q9CYW4 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC10.66□□□□□ -0.7
Hdhd3Q9CYW4 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Hdhd3Q9CYW4 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hdhd3Q9CYW4 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hdhd3Q9CYW4 Gm25287-201ENSMUST00000103846 110 ntBASIC10.66□□□□□ -0.7
Hdhd3Q9CYW4 Gm22918-201ENSMUST00000103855 110 ntBASIC10.66□□□□□ -0.7
Hdhd3Q9CYW4 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Hdhd3Q9CYW4 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Hdhd3Q9CYW4 Gm15467-201ENSMUST00000120582 445 ntBASIC10.66□□□□□ -0.7
Hdhd3Q9CYW4 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC10.66□□□□□ -0.7
Hdhd3Q9CYW4 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC10.66□□□□□ -0.7
Hdhd3Q9CYW4 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hdhd3Q9CYW4 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC10.66□□□□□ -0.7
Hdhd3Q9CYW4 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC10.66□□□□□ -0.7
Hdhd3Q9CYW4 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hdhd3Q9CYW4 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC10.66□□□□□ -0.7
Hdhd3Q9CYW4 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC10.66□□□□□ -0.7
Hdhd3Q9CYW4 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Hdhd3Q9CYW4 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC10.66□□□□□ -0.7
Hdhd3Q9CYW4 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Hdhd3Q9CYW4 AC133598.3-202ENSMUST00000224219 531 ntBASIC10.66□□□□□ -0.7
Hdhd3Q9CYW4 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC10.66□□□□□ -0.7
Hdhd3Q9CYW4 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms