Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ssu72Q9CY97 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ssu72Q9CY97 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ssu72Q9CY97 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ssu72Q9CY97 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ssu72Q9CY97 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ssu72Q9CY97 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ssu72Q9CY97 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ssu72Q9CY97 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ssu72Q9CY97 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ssu72Q9CY97 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ssu72Q9CY97 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ssu72Q9CY97 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ssu72Q9CY97 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ssu72Q9CY97 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
Ssu72Q9CY97 Daam2-202ENSMUST00000224595 1926 ntBASIC13.04□□□□□ -0.32
Ssu72Q9CY97 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ssu72Q9CY97 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ssu72Q9CY97 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.04□□□□□ -0.32
Ssu72Q9CY97 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC13.04□□□□□ -0.32
Ssu72Q9CY97 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Ssu72Q9CY97 Gm12485-201ENSMUST00000119641 291 ntBASIC13.04□□□□□ -0.32
Ssu72Q9CY97 Gm14767-201ENSMUST00000121559 586 ntBASIC13.04□□□□□ -0.32
Ssu72Q9CY97 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.04□□□□□ -0.32
Ssu72Q9CY97 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.04□□□□□ -0.32
Ssu72Q9CY97 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.04□□□□□ -0.32
Ssu72Q9CY97 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ssu72Q9CY97 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.04□□□□□ -0.32
Ssu72Q9CY97 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ssu72Q9CY97 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ssu72Q9CY97 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ssu72Q9CY97 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
Ssu72Q9CY97 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ssu72Q9CY97 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Ssu72Q9CY97 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ssu72Q9CY97 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ssu72Q9CY97 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ssu72Q9CY97 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ssu72Q9CY97 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ssu72Q9CY97 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Ssu72Q9CY97 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ssu72Q9CY97 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ssu72Q9CY97 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Ssu72Q9CY97 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ssu72Q9CY97 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ssu72Q9CY97 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ssu72Q9CY97 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.04□□□□□ -0.32
Ssu72Q9CY97 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ssu72Q9CY97 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ssu72Q9CY97 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ssu72Q9CY97 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ssu72Q9CY97 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ssu72Q9CY97 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Ssu72Q9CY97 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ssu72Q9CY97 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.03□□□□□ -0.32
Ssu72Q9CY97 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ssu72Q9CY97 Gm9279-201ENSMUST00000223175 1606 ntBASIC13.03□□□□□ -0.32
Ssu72Q9CY97 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ssu72Q9CY97 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ssu72Q9CY97 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ssu72Q9CY97 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.03□□□□□ -0.32
Ssu72Q9CY97 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.03□□□□□ -0.32
Ssu72Q9CY97 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ssu72Q9CY97 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ssu72Q9CY97 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC13.03□□□□□ -0.32
Ssu72Q9CY97 Gm5312-201ENSMUST00000203728 547 ntBASIC13.03□□□□□ -0.32
Ssu72Q9CY97 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC13.03□□□□□ -0.32
Ssu72Q9CY97 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.03□□□□□ -0.32
Ssu72Q9CY97 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ssu72Q9CY97 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ssu72Q9CY97 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Ssu72Q9CY97 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Ssu72Q9CY97 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ssu72Q9CY97 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ssu72Q9CY97 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ssu72Q9CY97 Gm36970-201ENSMUST00000193688 1859 ntBASIC13.03□□□□□ -0.32
Ssu72Q9CY97 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ssu72Q9CY97 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ssu72Q9CY97 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Ssu72Q9CY97 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ssu72Q9CY97 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Ssu72Q9CY97 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC13.03□□□□□ -0.32
Ssu72Q9CY97 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ssu72Q9CY97 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ssu72Q9CY97 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ssu72Q9CY97 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ssu72Q9CY97 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Ssu72Q9CY97 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.32
Ssu72Q9CY97 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ssu72Q9CY97 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ssu72Q9CY97 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.32
Ssu72Q9CY97 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ssu72Q9CY97 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC13.02□□□□□ -0.33
Ssu72Q9CY97 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ssu72Q9CY97 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ssu72Q9CY97 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Ssu72Q9CY97 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.02□□□□□ -0.33
Ssu72Q9CY97 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ssu72Q9CY97 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC13.02□□□□□ -0.33
Ssu72Q9CY97 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms