Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ssr1Q9CY50 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ssr1Q9CY50 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ssr1Q9CY50 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ssr1Q9CY50 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Ssr1Q9CY50 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC14.33□□□□□ -0.12
Ssr1Q9CY50 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC14.33□□□□□ -0.12
Ssr1Q9CY50 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Ssr1Q9CY50 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Ssr1Q9CY50 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ssr1Q9CY50 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC14.33□□□□□ -0.12
Ssr1Q9CY50 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14.33□□□□□ -0.12
Ssr1Q9CY50 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC14.33□□□□□ -0.12
Ssr1Q9CY50 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Ssr1Q9CY50 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.33□□□□□ -0.12
Ssr1Q9CY50 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Ssr1Q9CY50 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Ssr1Q9CY50 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ssr1Q9CY50 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC14.33□□□□□ -0.12
Ssr1Q9CY50 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Ssr1Q9CY50 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Ssr1Q9CY50 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ssr1Q9CY50 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ssr1Q9CY50 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC14.33□□□□□ -0.12
Ssr1Q9CY50 Gm17795-201ENSMUST00000214505 757 ntBASIC14.33□□□□□ -0.12
Ssr1Q9CY50 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ssr1Q9CY50 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ssr1Q9CY50 Gm3695-201ENSMUST00000087222 1009 ntBASIC14.33□□□□□ -0.12
Ssr1Q9CY50 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ssr1Q9CY50 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC14.33□□□□□ -0.12
Ssr1Q9CY50 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ssr1Q9CY50 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ssr1Q9CY50 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC14.33□□□□□ -0.12
Ssr1Q9CY50 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.33□□□□□ -0.12
Ssr1Q9CY50 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ssr1Q9CY50 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Ssr1Q9CY50 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Ssr1Q9CY50 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ssr1Q9CY50 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ssr1Q9CY50 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Ssr1Q9CY50 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.12
Ssr1Q9CY50 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ssr1Q9CY50 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ssr1Q9CY50 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssr1Q9CY50 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssr1Q9CY50 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssr1Q9CY50 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ssr1Q9CY50 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssr1Q9CY50 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssr1Q9CY50 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssr1Q9CY50 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Ssr1Q9CY50 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssr1Q9CY50 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssr1Q9CY50 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC14.32□□□□□ -0.12
Ssr1Q9CY50 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ssr1Q9CY50 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ssr1Q9CY50 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC14.32□□□□□ -0.12
Ssr1Q9CY50 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.32□□□□□ -0.12
Ssr1Q9CY50 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC14.32□□□□□ -0.12
Ssr1Q9CY50 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC14.32□□□□□ -0.12
Ssr1Q9CY50 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC14.32□□□□□ -0.12
Ssr1Q9CY50 Gm18905-201ENSMUST00000205454 928 ntBASIC14.32□□□□□ -0.12
Ssr1Q9CY50 AC126408.1-201ENSMUST00000225184 523 ntBASIC14.32□□□□□ -0.12
Ssr1Q9CY50 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssr1Q9CY50 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ssr1Q9CY50 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssr1Q9CY50 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.32□□□□□ -0.12
Ssr1Q9CY50 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssr1Q9CY50 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC14.32□□□□□ -0.12
Ssr1Q9CY50 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssr1Q9CY50 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ssr1Q9CY50 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Ssr1Q9CY50 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssr1Q9CY50 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ssr1Q9CY50 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssr1Q9CY50 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ssr1Q9CY50 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssr1Q9CY50 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssr1Q9CY50 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssr1Q9CY50 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Ssr1Q9CY50 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssr1Q9CY50 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ssr1Q9CY50 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssr1Q9CY50 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Ssr1Q9CY50 Gm13730-201ENSMUST00000121036 1462 ntBASIC14.31□□□□□ -0.12
Ssr1Q9CY50 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssr1Q9CY50 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Ssr1Q9CY50 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Ssr1Q9CY50 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssr1Q9CY50 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssr1Q9CY50 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssr1Q9CY50 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssr1Q9CY50 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssr1Q9CY50 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssr1Q9CY50 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssr1Q9CY50 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Ssr1Q9CY50 Gm14452-201ENSMUST00000118680 1632 ntBASIC14.31□□□□□ -0.12
Ssr1Q9CY50 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssr1Q9CY50 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC14.31□□□□□ -0.12
Ssr1Q9CY50 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms