Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Rnf135Q9CWS1 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf135Q9CWS1 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf135Q9CWS1 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Rnf135Q9CWS1 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf135Q9CWS1 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf135Q9CWS1 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf135Q9CWS1 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf135Q9CWS1 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Rnf135Q9CWS1 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf135Q9CWS1 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC13.71□□□□□ -0.21
Rnf135Q9CWS1 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf135Q9CWS1 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.71□□□□□ -0.21
Rnf135Q9CWS1 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf135Q9CWS1 Gm26464-201ENSMUST00000157094 305 ntBASIC13.71□□□□□ -0.21
Rnf135Q9CWS1 Gm5279-201ENSMUST00000199575 745 ntBASIC13.71□□□□□ -0.21
Rnf135Q9CWS1 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf135Q9CWS1 AC153962.4-201ENSMUST00000217878 242 ntBASIC13.71□□□□□ -0.21
Rnf135Q9CWS1 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.71□□□□□ -0.21
Rnf135Q9CWS1 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf135Q9CWS1 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rnf135Q9CWS1 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Rnf135Q9CWS1 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rnf135Q9CWS1 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rnf135Q9CWS1 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rnf135Q9CWS1 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.71□□□□□ -0.22
Rnf135Q9CWS1 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Rnf135Q9CWS1 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
Rnf135Q9CWS1 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf135Q9CWS1 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
Rnf135Q9CWS1 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
Rnf135Q9CWS1 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf135Q9CWS1 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf135Q9CWS1 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf135Q9CWS1 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.7□□□□□ -0.22
Rnf135Q9CWS1 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf135Q9CWS1 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf135Q9CWS1 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13.7□□□□□ -0.22
Rnf135Q9CWS1 Gm15806-201ENSMUST00000120696 955 ntBASIC13.7□□□□□ -0.22
Rnf135Q9CWS1 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf135Q9CWS1 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.7□□□□□ -0.22
Rnf135Q9CWS1 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf135Q9CWS1 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf135Q9CWS1 Gm6266-201ENSMUST00000203844 806 ntBASIC13.7□□□□□ -0.22
Rnf135Q9CWS1 Gm19078-201ENSMUST00000206311 727 ntBASIC13.7□□□□□ -0.22
Rnf135Q9CWS1 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
Rnf135Q9CWS1 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf135Q9CWS1 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf135Q9CWS1 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf135Q9CWS1 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf135Q9CWS1 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf135Q9CWS1 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf135Q9CWS1 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf135Q9CWS1 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf135Q9CWS1 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf135Q9CWS1 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Rnf135Q9CWS1 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf135Q9CWS1 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf135Q9CWS1 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf135Q9CWS1 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf135Q9CWS1 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf135Q9CWS1 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf135Q9CWS1 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf135Q9CWS1 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf135Q9CWS1 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf135Q9CWS1 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.69□□□□□ -0.22
Rnf135Q9CWS1 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf135Q9CWS1 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf135Q9CWS1 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Rnf135Q9CWS1 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf135Q9CWS1 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf135Q9CWS1 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Rnf135Q9CWS1 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Rnf135Q9CWS1 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.69□□□□□ -0.22
Rnf135Q9CWS1 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.69□□□□□ -0.22
Rnf135Q9CWS1 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf135Q9CWS1 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.69□□□□□ -0.22
Rnf135Q9CWS1 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Rnf135Q9CWS1 Mir7085-201ENSMUST00000184353 66 ntBASIC13.69□□□□□ -0.22
Rnf135Q9CWS1 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.69□□□□□ -0.22
Rnf135Q9CWS1 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf135Q9CWS1 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf135Q9CWS1 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf135Q9CWS1 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf135Q9CWS1 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf135Q9CWS1 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf135Q9CWS1 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Rnf135Q9CWS1 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf135Q9CWS1 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf135Q9CWS1 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Rnf135Q9CWS1 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf135Q9CWS1 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf135Q9CWS1 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf135Q9CWS1 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf135Q9CWS1 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Rnf135Q9CWS1 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf135Q9CWS1 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf135Q9CWS1 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf135Q9CWS1 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf135Q9CWS1 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms