Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smc3Q9CW03 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smc3Q9CW03 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Smc3Q9CW03 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Smc3Q9CW03 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smc3Q9CW03 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smc3Q9CW03 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Smc3Q9CW03 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Smc3Q9CW03 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Smc3Q9CW03 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smc3Q9CW03 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smc3Q9CW03 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smc3Q9CW03 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Smc3Q9CW03 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC15.46■□□□□ 0.07
Smc3Q9CW03 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smc3Q9CW03 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
Smc3Q9CW03 Mir7684-201ENSMUST00000183858 60 ntBASIC15.46■□□□□ 0.07
Smc3Q9CW03 Mir8102-201ENSMUST00000184148 139 ntBASIC15.46■□□□□ 0.07
Smc3Q9CW03 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Smc3Q9CW03 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smc3Q9CW03 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smc3Q9CW03 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Smc3Q9CW03 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC15.46■□□□□ 0.07
Smc3Q9CW03 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smc3Q9CW03 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smc3Q9CW03 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Smc3Q9CW03 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smc3Q9CW03 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
Smc3Q9CW03 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Smc3Q9CW03 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
Smc3Q9CW03 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Smc3Q9CW03 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC15.45■□□□□ 0.06
Smc3Q9CW03 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Smc3Q9CW03 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smc3Q9CW03 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smc3Q9CW03 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smc3Q9CW03 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smc3Q9CW03 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Smc3Q9CW03 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smc3Q9CW03 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
Smc3Q9CW03 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Smc3Q9CW03 Gm28760-201ENSMUST00000185995 736 ntBASIC15.45■□□□□ 0.06
Smc3Q9CW03 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC15.45■□□□□ 0.06
Smc3Q9CW03 AC132863.2-201ENSMUST00000226643 799 ntBASIC15.45■□□□□ 0.06
Smc3Q9CW03 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smc3Q9CW03 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smc3Q9CW03 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smc3Q9CW03 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smc3Q9CW03 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC15.45■□□□□ 0.06
Smc3Q9CW03 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Smc3Q9CW03 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smc3Q9CW03 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC15.45■□□□□ 0.06
Smc3Q9CW03 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Smc3Q9CW03 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smc3Q9CW03 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smc3Q9CW03 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smc3Q9CW03 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smc3Q9CW03 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smc3Q9CW03 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Smc3Q9CW03 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smc3Q9CW03 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smc3Q9CW03 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smc3Q9CW03 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Smc3Q9CW03 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Smc3Q9CW03 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Smc3Q9CW03 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smc3Q9CW03 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC15.44■□□□□ 0.06
Smc3Q9CW03 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Smc3Q9CW03 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smc3Q9CW03 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Smc3Q9CW03 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smc3Q9CW03 Gm14719-201ENSMUST00000121891 340 ntBASIC15.44■□□□□ 0.06
Smc3Q9CW03 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC15.44■□□□□ 0.06
Smc3Q9CW03 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC15.44■□□□□ 0.06
Smc3Q9CW03 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC15.44■□□□□ 0.06
Smc3Q9CW03 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Smc3Q9CW03 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smc3Q9CW03 Gm24694-201ENSMUST00000180054 110 ntBASIC15.44■□□□□ 0.06
Smc3Q9CW03 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smc3Q9CW03 Gm27663-201ENSMUST00000184839 110 ntBASIC15.44■□□□□ 0.06
Smc3Q9CW03 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC15.44■□□□□ 0.06
Smc3Q9CW03 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smc3Q9CW03 AC134335.2-201ENSMUST00000227660 440 ntBASIC15.44■□□□□ 0.06
Smc3Q9CW03 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Smc3Q9CW03 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Smc3Q9CW03 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smc3Q9CW03 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Smc3Q9CW03 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Smc3Q9CW03 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smc3Q9CW03 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Smc3Q9CW03 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Smc3Q9CW03 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smc3Q9CW03 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc3Q9CW03 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Smc3Q9CW03 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc3Q9CW03 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc3Q9CW03 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Smc3Q9CW03 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Smc3Q9CW03 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Smc3Q9CW03 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC15.43■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms