Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Otud1Q9CUB6 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Otud1Q9CUB6 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Otud1Q9CUB6 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Otud1Q9CUB6 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Otud1Q9CUB6 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Otud1Q9CUB6 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Otud1Q9CUB6 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Otud1Q9CUB6 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Otud1Q9CUB6 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Otud1Q9CUB6 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.47□□□□□ -0.41
Otud1Q9CUB6 Gm8062-201ENSMUST00000139696 444 ntBASIC12.47□□□□□ -0.41
Otud1Q9CUB6 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Otud1Q9CUB6 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.47□□□□□ -0.41
Otud1Q9CUB6 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Otud1Q9CUB6 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.47□□□□□ -0.41
Otud1Q9CUB6 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.47□□□□□ -0.41
Otud1Q9CUB6 Gm7029-201ENSMUST00000173226 450 ntBASIC12.47□□□□□ -0.41
Otud1Q9CUB6 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Otud1Q9CUB6 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.47□□□□□ -0.41
Otud1Q9CUB6 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.47□□□□□ -0.41
Otud1Q9CUB6 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC12.47□□□□□ -0.41
Otud1Q9CUB6 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Otud1Q9CUB6 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC12.47□□□□□ -0.41
Otud1Q9CUB6 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Otud1Q9CUB6 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Otud1Q9CUB6 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Otud1Q9CUB6 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Otud1Q9CUB6 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.47□□□□□ -0.41
Otud1Q9CUB6 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Otud1Q9CUB6 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Otud1Q9CUB6 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Otud1Q9CUB6 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Otud1Q9CUB6 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.47□□□□□ -0.41
Otud1Q9CUB6 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Otud1Q9CUB6 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Otud1Q9CUB6 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Otud1Q9CUB6 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.47□□□□□ -0.41
Otud1Q9CUB6 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.47□□□□□ -0.41
Otud1Q9CUB6 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Otud1Q9CUB6 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Otud1Q9CUB6 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Otud1Q9CUB6 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Otud1Q9CUB6 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
Otud1Q9CUB6 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Otud1Q9CUB6 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.46□□□□□ -0.41
Otud1Q9CUB6 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Otud1Q9CUB6 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.46□□□□□ -0.41
Otud1Q9CUB6 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.46□□□□□ -0.41
Otud1Q9CUB6 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Otud1Q9CUB6 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Otud1Q9CUB6 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Otud1Q9CUB6 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Otud1Q9CUB6 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Otud1Q9CUB6 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Otud1Q9CUB6 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Otud1Q9CUB6 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.46□□□□□ -0.41
Otud1Q9CUB6 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Otud1Q9CUB6 Gm12742-201ENSMUST00000117326 410 ntBASIC12.46□□□□□ -0.41
Otud1Q9CUB6 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC12.46□□□□□ -0.41
Otud1Q9CUB6 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.46□□□□□ -0.41
Otud1Q9CUB6 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
Otud1Q9CUB6 Gm45841-201ENSMUST00000207700 164 ntBASIC12.46□□□□□ -0.41
Otud1Q9CUB6 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.46□□□□□ -0.41
Otud1Q9CUB6 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Otud1Q9CUB6 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Otud1Q9CUB6 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Otud1Q9CUB6 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.46□□□□□ -0.41
Otud1Q9CUB6 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Otud1Q9CUB6 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Otud1Q9CUB6 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.46□□□□□ -0.42
Otud1Q9CUB6 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Otud1Q9CUB6 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Otud1Q9CUB6 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Otud1Q9CUB6 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Otud1Q9CUB6 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Otud1Q9CUB6 Rubie-203ENSMUST00000227803 2430 ntBASIC12.46□□□□□ -0.42
Otud1Q9CUB6 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Otud1Q9CUB6 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.46□□□□□ -0.42
Otud1Q9CUB6 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Otud1Q9CUB6 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Otud1Q9CUB6 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Otud1Q9CUB6 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Otud1Q9CUB6 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Otud1Q9CUB6 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Otud1Q9CUB6 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Otud1Q9CUB6 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Otud1Q9CUB6 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Otud1Q9CUB6 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Otud1Q9CUB6 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Otud1Q9CUB6 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Otud1Q9CUB6 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.45□□□□□ -0.42
Otud1Q9CUB6 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Otud1Q9CUB6 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.45□□□□□ -0.42
Otud1Q9CUB6 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.45□□□□□ -0.42
Otud1Q9CUB6 Gm25509-201ENSMUST00000116985 106 ntBASIC12.45□□□□□ -0.42
Otud1Q9CUB6 Gm12384-201ENSMUST00000119228 919 ntBASIC12.45□□□□□ -0.42
Otud1Q9CUB6 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Otud1Q9CUB6 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Otud1Q9CUB6 Snora78-201ENSMUST00000158630 128 ntBASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms