Protein–RNA interactions for Protein: Q9CQ02

Commd4, COMM domain-containing protein 4, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Commd4Q9CQ02 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Commd4Q9CQ02 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Commd4Q9CQ02 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Commd4Q9CQ02 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Commd4Q9CQ02 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Commd4Q9CQ02 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Commd4Q9CQ02 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Commd4Q9CQ02 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Commd4Q9CQ02 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Commd4Q9CQ02 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Commd4Q9CQ02 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Commd4Q9CQ02 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Commd4Q9CQ02 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Commd4Q9CQ02 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Commd4Q9CQ02 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC11.74□□□□□ -0.53
Commd4Q9CQ02 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC11.74□□□□□ -0.53
Commd4Q9CQ02 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Commd4Q9CQ02 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Commd4Q9CQ02 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Commd4Q9CQ02 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Commd4Q9CQ02 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC11.74□□□□□ -0.53
Commd4Q9CQ02 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC11.74□□□□□ -0.53
Commd4Q9CQ02 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC11.74□□□□□ -0.53
Commd4Q9CQ02 Gm19931-201ENSMUST00000198920 368 ntBASIC11.74□□□□□ -0.53
Commd4Q9CQ02 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Commd4Q9CQ02 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Commd4Q9CQ02 AC124732.2-201ENSMUST00000221977 316 ntBASIC11.74□□□□□ -0.53
Commd4Q9CQ02 Gm6888-201ENSMUST00000221983 706 ntBASIC11.74□□□□□ -0.53
Commd4Q9CQ02 Rbfox2-208ENSMUST00000227930 1218 ntBASIC11.74□□□□□ -0.53
Commd4Q9CQ02 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Commd4Q9CQ02 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Commd4Q9CQ02 Fgf17-202ENSMUST00000227123 1336 ntBASIC11.74□□□□□ -0.53
Commd4Q9CQ02 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.74□□□□□ -0.53
Commd4Q9CQ02 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Commd4Q9CQ02 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Commd4Q9CQ02 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Commd4Q9CQ02 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Commd4Q9CQ02 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Commd4Q9CQ02 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.74□□□□□ -0.53
Commd4Q9CQ02 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Commd4Q9CQ02 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.74□□□□□ -0.53
Commd4Q9CQ02 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Commd4Q9CQ02 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Commd4Q9CQ02 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Commd4Q9CQ02 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Commd4Q9CQ02 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Commd4Q9CQ02 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Commd4Q9CQ02 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Commd4Q9CQ02 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Commd4Q9CQ02 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Commd4Q9CQ02 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Commd4Q9CQ02 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Commd4Q9CQ02 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Commd4Q9CQ02 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Commd4Q9CQ02 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Commd4Q9CQ02 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC11.73□□□□□ -0.53
Commd4Q9CQ02 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Commd4Q9CQ02 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC11.73□□□□□ -0.53
Commd4Q9CQ02 Cd63-ps-201ENSMUST00000145417 875 ntBASIC11.73□□□□□ -0.53
Commd4Q9CQ02 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC11.73□□□□□ -0.53
Commd4Q9CQ02 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Commd4Q9CQ02 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Commd4Q9CQ02 Gm25948-201ENSMUST00000175334 112 ntBASIC11.73□□□□□ -0.53
Commd4Q9CQ02 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC11.73□□□□□ -0.53
Commd4Q9CQ02 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Commd4Q9CQ02 Gm27321-201ENSMUST00000185021 205 ntBASIC11.73□□□□□ -0.53
Commd4Q9CQ02 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Commd4Q9CQ02 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Commd4Q9CQ02 Gm17795-201ENSMUST00000214505 757 ntBASIC11.73□□□□□ -0.53
Commd4Q9CQ02 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.73□□□□□ -0.53
Commd4Q9CQ02 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Commd4Q9CQ02 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Commd4Q9CQ02 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Commd4Q9CQ02 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Commd4Q9CQ02 Gm8396-201ENSMUST00000057361 823 ntBASIC11.73□□□□□ -0.53
Commd4Q9CQ02 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Commd4Q9CQ02 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Commd4Q9CQ02 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
Commd4Q9CQ02 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Commd4Q9CQ02 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Commd4Q9CQ02 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Commd4Q9CQ02 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Commd4Q9CQ02 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Commd4Q9CQ02 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Commd4Q9CQ02 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Commd4Q9CQ02 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.72□□□□□ -0.53
Commd4Q9CQ02 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Commd4Q9CQ02 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Commd4Q9CQ02 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC11.72□□□□□ -0.53
Commd4Q9CQ02 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Commd4Q9CQ02 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Commd4Q9CQ02 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Commd4Q9CQ02 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Commd4Q9CQ02 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Commd4Q9CQ02 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Commd4Q9CQ02 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
Commd4Q9CQ02 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Commd4Q9CQ02 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC11.72□□□□□ -0.53
Commd4Q9CQ02 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC11.72□□□□□ -0.53
Commd4Q9CQ02 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms