Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC14.99□□□□□ -0.01
Trim11Q99PQ2 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim11Q99PQ2 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim11Q99PQ2 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim11Q99PQ2 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim11Q99PQ2 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim11Q99PQ2 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim11Q99PQ2 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim11Q99PQ2 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim11Q99PQ2 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim11Q99PQ2 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim11Q99PQ2 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim11Q99PQ2 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim11Q99PQ2 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim11Q99PQ2 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim11Q99PQ2 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC14.98□□□□□ -0.01
Trim11Q99PQ2 Auts2-212ENSMUST00000178555 309 ntBASIC14.98□□□□□ -0.01
Trim11Q99PQ2 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
Trim11Q99PQ2 Gm18624-201ENSMUST00000220966 658 ntBASIC14.98□□□□□ -0.01
Trim11Q99PQ2 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim11Q99PQ2 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim11Q99PQ2 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC14.98□□□□□ -0.01
Trim11Q99PQ2 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim11Q99PQ2 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Trim11Q99PQ2 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim11Q99PQ2 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC14.98□□□□□ -0.01
Trim11Q99PQ2 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Trim11Q99PQ2 Gm9025-201ENSMUST00000122415 1575 ntBASIC14.98□□□□□ -0.01
Trim11Q99PQ2 AC113060.1-201ENSMUST00000225689 1573 ntBASIC14.98□□□□□ -0.01
Trim11Q99PQ2 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim11Q99PQ2 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim11Q99PQ2 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim11Q99PQ2 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim11Q99PQ2 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim11Q99PQ2 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim11Q99PQ2 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Trim11Q99PQ2 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Trim11Q99PQ2 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Trim11Q99PQ2 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim11Q99PQ2 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trim11Q99PQ2 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC14.97□□□□□ -0.01
Trim11Q99PQ2 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim11Q99PQ2 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trim11Q99PQ2 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC14.97□□□□□ -0.01
Trim11Q99PQ2 Gm7488-201ENSMUST00000117148 684 ntBASIC14.97□□□□□ -0.01
Trim11Q99PQ2 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC14.97□□□□□ -0.01
Trim11Q99PQ2 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim11Q99PQ2 Gm12859-201ENSMUST00000117834 427 ntBASIC14.97□□□□□ -0.01
Trim11Q99PQ2 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Trim11Q99PQ2 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim11Q99PQ2 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim11Q99PQ2 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Trim11Q99PQ2 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC14.97□□□□□ -0.01
Trim11Q99PQ2 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC14.97□□□□□ -0.01
Trim11Q99PQ2 AC158982.1-201ENSMUST00000228377 901 ntBASIC14.97□□□□□ -0.01
Trim11Q99PQ2 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim11Q99PQ2 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim11Q99PQ2 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Trim11Q99PQ2 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim11Q99PQ2 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim11Q99PQ2 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trim11Q99PQ2 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim11Q99PQ2 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim11Q99PQ2 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Trim11Q99PQ2 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim11Q99PQ2 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trim11Q99PQ2 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim11Q99PQ2 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Trim11Q99PQ2 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trim11Q99PQ2 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim11Q99PQ2 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim11Q99PQ2 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim11Q99PQ2 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim11Q99PQ2 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trim11Q99PQ2 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim11Q99PQ2 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim11Q99PQ2 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trim11Q99PQ2 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC14.96□□□□□ -0.01
Trim11Q99PQ2 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
Trim11Q99PQ2 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim11Q99PQ2 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC14.96□□□□□ -0.01
Trim11Q99PQ2 AC155286.1-201ENSMUST00000218632 448 ntBASIC14.96□□□□□ -0.01
Trim11Q99PQ2 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC14.96□□□□□ -0.01
Trim11Q99PQ2 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim11Q99PQ2 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim11Q99PQ2 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim11Q99PQ2 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim11Q99PQ2 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim11Q99PQ2 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim11Q99PQ2 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Trim11Q99PQ2 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
Trim11Q99PQ2 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim11Q99PQ2 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim11Q99PQ2 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trim11Q99PQ2 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim11Q99PQ2 Abhd6-203ENSMUST00000225234 1958 ntBASIC14.96□□□□□ -0.01
Trim11Q99PQ2 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim11Q99PQ2 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Trim11Q99PQ2 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trim11Q99PQ2 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 85.7 ms