Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim8Q99PJ2 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim8Q99PJ2 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trim8Q99PJ2 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim8Q99PJ2 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim8Q99PJ2 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim8Q99PJ2 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trim8Q99PJ2 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.91□□□□□ -0.34
Trim8Q99PJ2 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trim8Q99PJ2 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.91□□□□□ -0.34
Trim8Q99PJ2 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim8Q99PJ2 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim8Q99PJ2 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trim8Q99PJ2 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Trim8Q99PJ2 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim8Q99PJ2 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim8Q99PJ2 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.91□□□□□ -0.34
Trim8Q99PJ2 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim8Q99PJ2 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.91□□□□□ -0.34
Trim8Q99PJ2 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim8Q99PJ2 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim8Q99PJ2 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trim8Q99PJ2 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim8Q99PJ2 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trim8Q99PJ2 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim8Q99PJ2 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.9□□□□□ -0.34
Trim8Q99PJ2 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.9□□□□□ -0.34
Trim8Q99PJ2 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trim8Q99PJ2 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Trim8Q99PJ2 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim8Q99PJ2 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim8Q99PJ2 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Trim8Q99PJ2 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.9□□□□□ -0.34
Trim8Q99PJ2 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim8Q99PJ2 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim8Q99PJ2 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.9□□□□□ -0.34
Trim8Q99PJ2 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim8Q99PJ2 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim8Q99PJ2 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim8Q99PJ2 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim8Q99PJ2 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim8Q99PJ2 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim8Q99PJ2 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.9□□□□□ -0.34
Trim8Q99PJ2 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trim8Q99PJ2 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim8Q99PJ2 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim8Q99PJ2 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.9□□□□□ -0.34
Trim8Q99PJ2 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.9□□□□□ -0.34
Trim8Q99PJ2 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.9□□□□□ -0.34
Trim8Q99PJ2 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.9□□□□□ -0.34
Trim8Q99PJ2 Gm14057-201ENSMUST00000120631 482 ntBASIC12.9□□□□□ -0.34
Trim8Q99PJ2 Gm12403-201ENSMUST00000121384 959 ntBASIC12.9□□□□□ -0.34
Trim8Q99PJ2 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Trim8Q99PJ2 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC12.9□□□□□ -0.34
Trim8Q99PJ2 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim8Q99PJ2 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.9□□□□□ -0.34
Trim8Q99PJ2 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.9□□□□□ -0.34
Trim8Q99PJ2 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.9□□□□□ -0.34
Trim8Q99PJ2 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.9□□□□□ -0.34
Trim8Q99PJ2 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.9□□□□□ -0.34
Trim8Q99PJ2 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim8Q99PJ2 Gm45841-201ENSMUST00000207700 164 ntBASIC12.9□□□□□ -0.34
Trim8Q99PJ2 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim8Q99PJ2 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim8Q99PJ2 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim8Q99PJ2 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.9□□□□□ -0.34
Trim8Q99PJ2 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim8Q99PJ2 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim8Q99PJ2 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim8Q99PJ2 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Trim8Q99PJ2 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim8Q99PJ2 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim8Q99PJ2 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim8Q99PJ2 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim8Q99PJ2 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trim8Q99PJ2 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trim8Q99PJ2 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trim8Q99PJ2 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim8Q99PJ2 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Trim8Q99PJ2 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim8Q99PJ2 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim8Q99PJ2 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim8Q99PJ2 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim8Q99PJ2 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.89□□□□□ -0.35
Trim8Q99PJ2 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim8Q99PJ2 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim8Q99PJ2 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim8Q99PJ2 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim8Q99PJ2 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim8Q99PJ2 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trim8Q99PJ2 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim8Q99PJ2 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim8Q99PJ2 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Trim8Q99PJ2 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim8Q99PJ2 Gm3436-201ENSMUST00000179930 840 ntBASIC12.89□□□□□ -0.35
Trim8Q99PJ2 Gm27321-201ENSMUST00000185021 205 ntBASIC12.89□□□□□ -0.35
Trim8Q99PJ2 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Trim8Q99PJ2 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.89□□□□□ -0.35
Trim8Q99PJ2 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim8Q99PJ2 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms