Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh23Q99PF4 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC13.03□□□□□ -0.32
Cdh23Q99PF4 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC13.03□□□□□ -0.32
Cdh23Q99PF4 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh23Q99PF4 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC13.03□□□□□ -0.32
Cdh23Q99PF4 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh23Q99PF4 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh23Q99PF4 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Cdh23Q99PF4 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh23Q99PF4 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh23Q99PF4 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh23Q99PF4 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh23Q99PF4 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh23Q99PF4 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh23Q99PF4 Gm18159-201ENSMUST00000174516 1070 ntBASIC13.03□□□□□ -0.32
Cdh23Q99PF4 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC13.03□□□□□ -0.32
Cdh23Q99PF4 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh23Q99PF4 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC13.03□□□□□ -0.32
Cdh23Q99PF4 AC133602.1-201ENSMUST00000227510 509 ntBASIC13.03□□□□□ -0.32
Cdh23Q99PF4 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Cdh23Q99PF4 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh23Q99PF4 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.03□□□□□ -0.32
Cdh23Q99PF4 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh23Q99PF4 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh23Q99PF4 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cdh23Q99PF4 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.32
Cdh23Q99PF4 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cdh23Q99PF4 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Cdh23Q99PF4 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cdh23Q99PF4 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cdh23Q99PF4 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.02□□□□□ -0.32
Cdh23Q99PF4 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cdh23Q99PF4 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cdh23Q99PF4 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Cdh23Q99PF4 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC13.02□□□□□ -0.32
Cdh23Q99PF4 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC13.02□□□□□ -0.32
Cdh23Q99PF4 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Cdh23Q99PF4 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC13.02□□□□□ -0.32
Cdh23Q99PF4 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC13.02□□□□□ -0.32
Cdh23Q99PF4 Gm3619-201ENSMUST00000219947 775 ntBASIC13.02□□□□□ -0.32
Cdh23Q99PF4 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cdh23Q99PF4 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.02□□□□□ -0.32
Cdh23Q99PF4 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cdh23Q99PF4 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Cdh23Q99PF4 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Cdh23Q99PF4 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh23Q99PF4 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh23Q99PF4 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh23Q99PF4 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC13.02□□□□□ -0.33
Cdh23Q99PF4 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.02□□□□□ -0.33
Cdh23Q99PF4 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.02□□□□□ -0.33
Cdh23Q99PF4 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh23Q99PF4 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh23Q99PF4 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh23Q99PF4 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh23Q99PF4 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh23Q99PF4 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh23Q99PF4 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh23Q99PF4 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh23Q99PF4 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh23Q99PF4 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.02□□□□□ -0.33
Cdh23Q99PF4 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh23Q99PF4 Gm16166-201ENSMUST00000118291 787 ntBASIC13.01□□□□□ -0.33
Cdh23Q99PF4 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC13.01□□□□□ -0.33
Cdh23Q99PF4 Gm38297-201ENSMUST00000195122 1057 ntBASIC13.01□□□□□ -0.33
Cdh23Q99PF4 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Cdh23Q99PF4 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC13.01□□□□□ -0.33
Cdh23Q99PF4 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh23Q99PF4 CT025602.2-201ENSMUST00000226553 772 ntBASIC13.01□□□□□ -0.33
Cdh23Q99PF4 Gm25201-201ENSMUST00000083093 170 ntBASIC13.01□□□□□ -0.33
Cdh23Q99PF4 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh23Q99PF4 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh23Q99PF4 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh23Q99PF4 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Cdh23Q99PF4 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Cdh23Q99PF4 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.01□□□□□ -0.33
Cdh23Q99PF4 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Cdh23Q99PF4 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC13.01□□□□□ -0.33
Cdh23Q99PF4 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC13.01□□□□□ -0.33
Cdh23Q99PF4 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC13.01□□□□□ -0.33
Cdh23Q99PF4 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC13.01□□□□□ -0.33
Cdh23Q99PF4 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC13.01□□□□□ -0.33
Cdh23Q99PF4 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh23Q99PF4 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Cdh23Q99PF4 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC13.01□□□□□ -0.33
Cdh23Q99PF4 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Cdh23Q99PF4 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh23Q99PF4 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Cdh23Q99PF4 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh23Q99PF4 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh23Q99PF4 Gm16071-201ENSMUST00000119589 793 ntBASIC13.01□□□□□ -0.33
Cdh23Q99PF4 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Cdh23Q99PF4 Gm17826-201ENSMUST00000189720 798 ntBASIC13.01□□□□□ -0.33
Cdh23Q99PF4 Gm19091-201ENSMUST00000208120 978 ntBASIC13.01□□□□□ -0.33
Cdh23Q99PF4 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.01□□□□□ -0.33
Cdh23Q99PF4 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh23Q99PF4 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh23Q99PF4 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh23Q99PF4 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdh23Q99PF4 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms