Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chmp1b1Q99LU0 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Chmp1b1Q99LU0 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Chmp1b1Q99LU0 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Chmp1b1Q99LU0 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Chmp1b1Q99LU0 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Chmp1b1Q99LU0 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Chmp1b1Q99LU0 Gm22189-201ENSMUST00000103822 86 ntBASIC12.46□□□□□ -0.41
Chmp1b1Q99LU0 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
Chmp1b1Q99LU0 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.46□□□□□ -0.41
Chmp1b1Q99LU0 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Chmp1b1Q99LU0 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Chmp1b1Q99LU0 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
Chmp1b1Q99LU0 Gm5354-201ENSMUST00000182417 973 ntBASIC12.46□□□□□ -0.41
Chmp1b1Q99LU0 Gm28631-201ENSMUST00000190740 334 ntBASIC12.46□□□□□ -0.41
Chmp1b1Q99LU0 Gm43094-201ENSMUST00000196549 921 ntBASIC12.46□□□□□ -0.41
Chmp1b1Q99LU0 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.46□□□□□ -0.41
Chmp1b1Q99LU0 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Chmp1b1Q99LU0 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Chmp1b1Q99LU0 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Chmp1b1Q99LU0 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Chmp1b1Q99LU0 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Chmp1b1Q99LU0 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.46□□□□□ -0.41
Chmp1b1Q99LU0 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Chmp1b1Q99LU0 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Chmp1b1Q99LU0 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Chmp1b1Q99LU0 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Chmp1b1Q99LU0 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Chmp1b1Q99LU0 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Chmp1b1Q99LU0 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Chmp1b1Q99LU0 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.42
Chmp1b1Q99LU0 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Chmp1b1Q99LU0 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Chmp1b1Q99LU0 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Chmp1b1Q99LU0 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Chmp1b1Q99LU0 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Chmp1b1Q99LU0 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Chmp1b1Q99LU0 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp1b1Q99LU0 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp1b1Q99LU0 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp1b1Q99LU0 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp1b1Q99LU0 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp1b1Q99LU0 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp1b1Q99LU0 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp1b1Q99LU0 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp1b1Q99LU0 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp1b1Q99LU0 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp1b1Q99LU0 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp1b1Q99LU0 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp1b1Q99LU0 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp1b1Q99LU0 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Chmp1b1Q99LU0 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp1b1Q99LU0 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp1b1Q99LU0 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp1b1Q99LU0 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp1b1Q99LU0 Gm11524-201ENSMUST00000119349 807 ntBASIC12.45□□□□□ -0.42
Chmp1b1Q99LU0 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC12.45□□□□□ -0.42
Chmp1b1Q99LU0 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp1b1Q99LU0 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Chmp1b1Q99LU0 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp1b1Q99LU0 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp1b1Q99LU0 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp1b1Q99LU0 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp1b1Q99LU0 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp1b1Q99LU0 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Chmp1b1Q99LU0 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Chmp1b1Q99LU0 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp1b1Q99LU0 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp1b1Q99LU0 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp1b1Q99LU0 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.45□□□□□ -0.42
Chmp1b1Q99LU0 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp1b1Q99LU0 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Chmp1b1Q99LU0 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp1b1Q99LU0 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp1b1Q99LU0 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp1b1Q99LU0 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp1b1Q99LU0 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp1b1Q99LU0 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp1b1Q99LU0 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp1b1Q99LU0 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp1b1Q99LU0 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp1b1Q99LU0 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp1b1Q99LU0 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp1b1Q99LU0 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp1b1Q99LU0 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Chmp1b1Q99LU0 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp1b1Q99LU0 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp1b1Q99LU0 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp1b1Q99LU0 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp1b1Q99LU0 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp1b1Q99LU0 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp1b1Q99LU0 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.44□□□□□ -0.42
Chmp1b1Q99LU0 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp1b1Q99LU0 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.44□□□□□ -0.42
Chmp1b1Q99LU0 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp1b1Q99LU0 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Chmp1b1Q99LU0 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp1b1Q99LU0 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.44□□□□□ -0.42
Chmp1b1Q99LU0 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.44□□□□□ -0.42
Chmp1b1Q99LU0 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms