Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcd2Q99JR8 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcd2Q99JR8 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcd2Q99JR8 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcd2Q99JR8 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcd2Q99JR8 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Smarcd2Q99JR8 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcd2Q99JR8 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcd2Q99JR8 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcd2Q99JR8 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcd2Q99JR8 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcd2Q99JR8 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC13.23□□□□□ -0.29
Smarcd2Q99JR8 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcd2Q99JR8 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcd2Q99JR8 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcd2Q99JR8 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Smarcd2Q99JR8 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcd2Q99JR8 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcd2Q99JR8 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcd2Q99JR8 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcd2Q99JR8 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcd2Q99JR8 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcd2Q99JR8 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcd2Q99JR8 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcd2Q99JR8 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Smarcd2Q99JR8 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Smarcd2Q99JR8 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcd2Q99JR8 Gm23270-201ENSMUST00000104055 131 ntBASIC13.23□□□□□ -0.29
Smarcd2Q99JR8 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcd2Q99JR8 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcd2Q99JR8 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC13.23□□□□□ -0.29
Smarcd2Q99JR8 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcd2Q99JR8 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcd2Q99JR8 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcd2Q99JR8 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcd2Q99JR8 Gm9061-201ENSMUST00000182707 1006 ntBASIC13.23□□□□□ -0.29
Smarcd2Q99JR8 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcd2Q99JR8 Rps4l-202ENSMUST00000204242 789 ntBASIC13.23□□□□□ -0.29
Smarcd2Q99JR8 Gm5950-201ENSMUST00000213337 772 ntBASIC13.23□□□□□ -0.29
Smarcd2Q99JR8 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.23□□□□□ -0.29
Smarcd2Q99JR8 Gm9004-201ENSMUST00000218739 1222 ntBASIC13.23□□□□□ -0.29
Smarcd2Q99JR8 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcd2Q99JR8 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Smarcd2Q99JR8 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcd2Q99JR8 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcd2Q99JR8 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Smarcd2Q99JR8 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Smarcd2Q99JR8 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
Smarcd2Q99JR8 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcd2Q99JR8 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcd2Q99JR8 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcd2Q99JR8 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcd2Q99JR8 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcd2Q99JR8 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcd2Q99JR8 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.23□□□□□ -0.29
Smarcd2Q99JR8 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcd2Q99JR8 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcd2Q99JR8 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcd2Q99JR8 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcd2Q99JR8 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcd2Q99JR8 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcd2Q99JR8 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.23□□□□□ -0.29
Smarcd2Q99JR8 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcd2Q99JR8 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcd2Q99JR8 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcd2Q99JR8 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcd2Q99JR8 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcd2Q99JR8 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.22□□□□□ -0.29
Smarcd2Q99JR8 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcd2Q99JR8 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcd2Q99JR8 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcd2Q99JR8 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcd2Q99JR8 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcd2Q99JR8 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcd2Q99JR8 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcd2Q99JR8 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.22□□□□□ -0.29
Smarcd2Q99JR8 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.22□□□□□ -0.29
Smarcd2Q99JR8 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Smarcd2Q99JR8 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcd2Q99JR8 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcd2Q99JR8 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Smarcd2Q99JR8 Gm13492-201ENSMUST00000119772 665 ntBASIC13.22□□□□□ -0.29
Smarcd2Q99JR8 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC13.22□□□□□ -0.29
Smarcd2Q99JR8 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcd2Q99JR8 Gm5597-201ENSMUST00000182353 1193 ntBASIC13.22□□□□□ -0.29
Smarcd2Q99JR8 Gm38317-201ENSMUST00000195564 343 ntBASIC13.22□□□□□ -0.29
Smarcd2Q99JR8 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC13.22□□□□□ -0.29
Smarcd2Q99JR8 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC13.22□□□□□ -0.29
Smarcd2Q99JR8 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC13.22□□□□□ -0.29
Smarcd2Q99JR8 AC166051.1-201ENSMUST00000214313 210 ntBASIC13.22□□□□□ -0.29
Smarcd2Q99JR8 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcd2Q99JR8 AC126253.1-202ENSMUST00000226732 835 ntBASIC13.22□□□□□ -0.29
Smarcd2Q99JR8 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcd2Q99JR8 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcd2Q99JR8 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcd2Q99JR8 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcd2Q99JR8 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcd2Q99JR8 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcd2Q99JR8 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcd2Q99JR8 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms