Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Adra1a-206ENSMUST00000225182 2337 ntBASIC13.26□□□□□ -0.29
Cdk9Q99J95 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.26□□□□□ -0.29
Cdk9Q99J95 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdk9Q99J95 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdk9Q99J95 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdk9Q99J95 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Cdk9Q99J95 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdk9Q99J95 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdk9Q99J95 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdk9Q99J95 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdk9Q99J95 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdk9Q99J95 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdk9Q99J95 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cdk9Q99J95 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdk9Q99J95 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdk9Q99J95 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Cdk9Q99J95 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdk9Q99J95 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk9Q99J95 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk9Q99J95 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.25□□□□□ -0.29
Cdk9Q99J95 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk9Q99J95 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk9Q99J95 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk9Q99J95 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Cdk9Q99J95 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk9Q99J95 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.25□□□□□ -0.29
Cdk9Q99J95 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.25□□□□□ -0.29
Cdk9Q99J95 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk9Q99J95 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk9Q99J95 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk9Q99J95 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.25□□□□□ -0.29
Cdk9Q99J95 Gm25948-201ENSMUST00000175334 112 ntBASIC13.25□□□□□ -0.29
Cdk9Q99J95 Gm18766-201ENSMUST00000189811 808 ntBASIC13.25□□□□□ -0.29
Cdk9Q99J95 Gm29541-201ENSMUST00000191351 678 ntBASIC13.25□□□□□ -0.29
Cdk9Q99J95 Gm33320-201ENSMUST00000192232 530 ntBASIC13.25□□□□□ -0.29
Cdk9Q99J95 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk9Q99J95 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk9Q99J95 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.25□□□□□ -0.29
Cdk9Q99J95 Gm44872-201ENSMUST00000207864 420 ntBASIC13.25□□□□□ -0.29
Cdk9Q99J95 Dupd1-202ENSMUST00000224735 548 ntBASIC13.25□□□□□ -0.29
Cdk9Q99J95 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk9Q99J95 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk9Q99J95 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Cdk9Q99J95 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk9Q99J95 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Cdk9Q99J95 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk9Q99J95 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk9Q99J95 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk9Q99J95 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk9Q99J95 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.25□□□□□ -0.29
Cdk9Q99J95 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk9Q99J95 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk9Q99J95 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Cdk9Q99J95 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk9Q99J95 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk9Q99J95 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk9Q99J95 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk9Q99J95 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk9Q99J95 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk9Q99J95 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk9Q99J95 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk9Q99J95 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk9Q99J95 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk9Q99J95 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
Cdk9Q99J95 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdk9Q99J95 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Cdk9Q99J95 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdk9Q99J95 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdk9Q99J95 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdk9Q99J95 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdk9Q99J95 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.24□□□□□ -0.29
Cdk9Q99J95 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdk9Q99J95 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.24□□□□□ -0.29
Cdk9Q99J95 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdk9Q99J95 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdk9Q99J95 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdk9Q99J95 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdk9Q99J95 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdk9Q99J95 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdk9Q99J95 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdk9Q99J95 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cdk9Q99J95 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdk9Q99J95 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdk9Q99J95 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdk9Q99J95 AC166574.4-201ENSMUST00000227165 1937 ntBASIC13.24□□□□□ -0.29
Cdk9Q99J95 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdk9Q99J95 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.24□□□□□ -0.29
Cdk9Q99J95 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cdk9Q99J95 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.24□□□□□ -0.29
Cdk9Q99J95 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cdk9Q99J95 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cdk9Q99J95 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdk9Q99J95 Gm8927-201ENSMUST00000181978 981 ntBASIC13.24□□□□□ -0.29
Cdk9Q99J95 Mir6956-201ENSMUST00000183598 62 ntBASIC13.24□□□□□ -0.29
Cdk9Q99J95 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.24□□□□□ -0.29
Cdk9Q99J95 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.24□□□□□ -0.29
Cdk9Q99J95 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.24□□□□□ -0.29
Cdk9Q99J95 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC13.24□□□□□ -0.29
Cdk9Q99J95 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.24□□□□□ -0.29
Cdk9Q99J95 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms