Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rfc4Q99J62 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rfc4Q99J62 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rfc4Q99J62 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rfc4Q99J62 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC15.11■□□□□ 0.01
Rfc4Q99J62 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rfc4Q99J62 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rfc4Q99J62 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rfc4Q99J62 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rfc4Q99J62 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Rfc4Q99J62 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rfc4Q99J62 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Rfc4Q99J62 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rfc4Q99J62 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rfc4Q99J62 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Rfc4Q99J62 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rfc4Q99J62 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Rfc4Q99J62 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rfc4Q99J62 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rfc4Q99J62 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rfc4Q99J62 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rfc4Q99J62 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rfc4Q99J62 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
Rfc4Q99J62 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Rfc4Q99J62 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC15.1■□□□□ 0.01
Rfc4Q99J62 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rfc4Q99J62 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rfc4Q99J62 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rfc4Q99J62 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rfc4Q99J62 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rfc4Q99J62 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rfc4Q99J62 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC15.1■□□□□ 0.01
Rfc4Q99J62 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rfc4Q99J62 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rfc4Q99J62 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC15.1■□□□□ 0.01
Rfc4Q99J62 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rfc4Q99J62 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rfc4Q99J62 Gm24990-201ENSMUST00000157406 323 ntBASIC15.1■□□□□ 0.01
Rfc4Q99J62 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC15.1■□□□□ 0.01
Rfc4Q99J62 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Rfc4Q99J62 Gm19963-201ENSMUST00000208413 1255 ntBASIC15.1■□□□□ 0.01
Rfc4Q99J62 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Rfc4Q99J62 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rfc4Q99J62 Gm2420-202ENSMUST00000202224 2249 ntBASIC15.1■□□□□ 0.01
Rfc4Q99J62 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC15.1■□□□□ 0.01
Rfc4Q99J62 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Rfc4Q99J62 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rfc4Q99J62 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Rfc4Q99J62 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Rfc4Q99J62 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rfc4Q99J62 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rfc4Q99J62 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rfc4Q99J62 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC15.1■□□□□ 0.01
Rfc4Q99J62 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC15.1■□□□□ 0.01
Rfc4Q99J62 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rfc4Q99J62 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Rfc4Q99J62 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rfc4Q99J62 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rfc4Q99J62 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Rfc4Q99J62 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rfc4Q99J62 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rfc4Q99J62 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rfc4Q99J62 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rfc4Q99J62 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rfc4Q99J62 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rfc4Q99J62 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rfc4Q99J62 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rfc4Q99J62 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC15.09■□□□□ 0.01
Rfc4Q99J62 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC15.09■□□□□ 0.01
Rfc4Q99J62 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rfc4Q99J62 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rfc4Q99J62 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC15.09■□□□□ 0.01
Rfc4Q99J62 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rfc4Q99J62 Gm11978-201ENSMUST00000122315 466 ntBASIC15.09■□□□□ 0.01
Rfc4Q99J62 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC15.09■□□□□ 0.01
Rfc4Q99J62 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC15.09■□□□□ 0.01
Rfc4Q99J62 Gm5869-201ENSMUST00000200248 1257 ntBASIC15.09■□□□□ 0.01
Rfc4Q99J62 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC15.09■□□□□ 0.01
Rfc4Q99J62 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rfc4Q99J62 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rfc4Q99J62 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rfc4Q99J62 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rfc4Q99J62 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Rfc4Q99J62 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rfc4Q99J62 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rfc4Q99J62 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rfc4Q99J62 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rfc4Q99J62 Matn2-206ENSMUST00000228570 2798 ntBASIC15.08■□□□□ 0.01
Rfc4Q99J62 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rfc4Q99J62 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Rfc4Q99J62 AC139054.1-201ENSMUST00000226898 1598 ntBASIC15.08■□□□□ 0
Rfc4Q99J62 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC15.08■□□□□ 0
Rfc4Q99J62 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Rfc4Q99J62 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Rfc4Q99J62 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC15.08■□□□□ 0
Rfc4Q99J62 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC15.08■□□□□ 0
Rfc4Q99J62 Gm12012-201ENSMUST00000118857 1066 ntBASIC15.08■□□□□ 0
Rfc4Q99J62 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rfc4Q99J62 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Rfc4Q99J62 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms