Protein–RNA interactions for Protein: Q91Y06

Pcdhb13, Protocadherin beta 13, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb13Q91Y06 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb13Q91Y06 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb13Q91Y06 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb13Q91Y06 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Pcdhb13Q91Y06 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb13Q91Y06 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb13Q91Y06 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb13Q91Y06 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.28□□□□□ -0.28
Pcdhb13Q91Y06 Gm15429-201ENSMUST00000151268 798 ntBASIC13.28□□□□□ -0.28
Pcdhb13Q91Y06 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Pcdhb13Q91Y06 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.28□□□□□ -0.28
Pcdhb13Q91Y06 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.28□□□□□ -0.28
Pcdhb13Q91Y06 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.28□□□□□ -0.28
Pcdhb13Q91Y06 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb13Q91Y06 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb13Q91Y06 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb13Q91Y06 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb13Q91Y06 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Pcdhb13Q91Y06 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.28□□□□□ -0.28
Pcdhb13Q91Y06 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb13Q91Y06 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb13Q91Y06 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb13Q91Y06 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb13Q91Y06 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb13Q91Y06 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb13Q91Y06 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb13Q91Y06 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.28□□□□□ -0.28
Pcdhb13Q91Y06 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb13Q91Y06 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhb13Q91Y06 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Pcdhb13Q91Y06 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.27□□□□□ -0.28
Pcdhb13Q91Y06 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhb13Q91Y06 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhb13Q91Y06 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Pcdhb13Q91Y06 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhb13Q91Y06 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhb13Q91Y06 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhb13Q91Y06 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhb13Q91Y06 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.27□□□□□ -0.28
Pcdhb13Q91Y06 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb13Q91Y06 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb13Q91Y06 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.27□□□□□ -0.29
Pcdhb13Q91Y06 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.27□□□□□ -0.29
Pcdhb13Q91Y06 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb13Q91Y06 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.27□□□□□ -0.29
Pcdhb13Q91Y06 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb13Q91Y06 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC13.27□□□□□ -0.29
Pcdhb13Q91Y06 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb13Q91Y06 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.27□□□□□ -0.29
Pcdhb13Q91Y06 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC13.27□□□□□ -0.29
Pcdhb13Q91Y06 Gm45668-201ENSMUST00000211271 493 ntBASIC13.27□□□□□ -0.29
Pcdhb13Q91Y06 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.27□□□□□ -0.29
Pcdhb13Q91Y06 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.27□□□□□ -0.29
Pcdhb13Q91Y06 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb13Q91Y06 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb13Q91Y06 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb13Q91Y06 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb13Q91Y06 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
Pcdhb13Q91Y06 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb13Q91Y06 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb13Q91Y06 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb13Q91Y06 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb13Q91Y06 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb13Q91Y06 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb13Q91Y06 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb13Q91Y06 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Pcdhb13Q91Y06 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb13Q91Y06 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb13Q91Y06 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb13Q91Y06 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb13Q91Y06 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb13Q91Y06 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb13Q91Y06 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.27□□□□□ -0.29
Pcdhb13Q91Y06 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb13Q91Y06 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb13Q91Y06 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb13Q91Y06 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb13Q91Y06 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Pcdhb13Q91Y06 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb13Q91Y06 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb13Q91Y06 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Pcdhb13Q91Y06 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.26□□□□□ -0.29
Pcdhb13Q91Y06 Gm5303-201ENSMUST00000117943 1252 ntBASIC13.26□□□□□ -0.29
Pcdhb13Q91Y06 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb13Q91Y06 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb13Q91Y06 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.26□□□□□ -0.29
Pcdhb13Q91Y06 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.26□□□□□ -0.29
Pcdhb13Q91Y06 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.26□□□□□ -0.29
Pcdhb13Q91Y06 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.26□□□□□ -0.29
Pcdhb13Q91Y06 Gm25116-201ENSMUST00000157191 122 ntBASIC13.26□□□□□ -0.29
Pcdhb13Q91Y06 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.26□□□□□ -0.29
Pcdhb13Q91Y06 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb13Q91Y06 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb13Q91Y06 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.26□□□□□ -0.29
Pcdhb13Q91Y06 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.26□□□□□ -0.29
Pcdhb13Q91Y06 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.26□□□□□ -0.29
Pcdhb13Q91Y06 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb13Q91Y06 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.26□□□□□ -0.29
Pcdhb13Q91Y06 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.26□□□□□ -0.29
Pcdhb13Q91Y06 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms