Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Dnhd1-201ENSMUST00000106776 1146 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb20Q91XZ9 Gm12792-201ENSMUST00000117669 1019 ntBASIC13.16□□□□□ -0.3
Pcdhb20Q91XZ9 Gm14253-201ENSMUST00000122112 639 ntBASIC13.16□□□□□ -0.3
Pcdhb20Q91XZ9 Far1os-201ENSMUST00000138253 893 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb20Q91XZ9 Gm13839-201ENSMUST00000151639 506 ntTSL 2 BASIC13.16□□□□□ -0.3
Pcdhb20Q91XZ9 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.16□□□□□ -0.3
Pcdhb20Q91XZ9 Gm26464-201ENSMUST00000157094 305 ntBASIC13.16□□□□□ -0.3
Pcdhb20Q91XZ9 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.16□□□□□ -0.3
Pcdhb20Q91XZ9 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb20Q91XZ9 Gm27701-201ENSMUST00000184498 110 ntBASIC13.16□□□□□ -0.3
Pcdhb20Q91XZ9 Gm29286-202ENSMUST00000187736 537 ntTSL 5 BASIC13.16□□□□□ -0.3
Pcdhb20Q91XZ9 Gm28987-201ENSMUST00000191071 537 ntTSL 5 BASIC13.16□□□□□ -0.3
Pcdhb20Q91XZ9 4930565D16Rik-201ENSMUST00000192777 1112 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb20Q91XZ9 9430087B13Rik-201ENSMUST00000196548 1085 ntBASIC13.16□□□□□ -0.3
Pcdhb20Q91XZ9 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.16□□□□□ -0.3
Pcdhb20Q91XZ9 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.16□□□□□ -0.3
Pcdhb20Q91XZ9 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb20Q91XZ9 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.16□□□□□ -0.3
Pcdhb20Q91XZ9 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb20Q91XZ9 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb20Q91XZ9 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb20Q91XZ9 Olfr622-201ENSMUST00000058744 1105 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Pcdhb20Q91XZ9 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb20Q91XZ9 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Pcdhb20Q91XZ9 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb20Q91XZ9 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb20Q91XZ9 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb20Q91XZ9 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb20Q91XZ9 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.16□□□□□ -0.3
Pcdhb20Q91XZ9 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb20Q91XZ9 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Pcdhb20Q91XZ9 Sox5os1-201ENSMUST00000156994 1585 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb20Q91XZ9 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb20Q91XZ9 Olfr197-202ENSMUST00000207772 1320 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Pcdhb20Q91XZ9 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb20Q91XZ9 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
Pcdhb20Q91XZ9 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb20Q91XZ9 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.15□□□□□ -0.3
Pcdhb20Q91XZ9 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb20Q91XZ9 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb20Q91XZ9 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Pcdhb20Q91XZ9 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb20Q91XZ9 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb20Q91XZ9 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb20Q91XZ9 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb20Q91XZ9 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb20Q91XZ9 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb20Q91XZ9 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb20Q91XZ9 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.15□□□□□ -0.3
Pcdhb20Q91XZ9 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.15□□□□□ -0.3
Pcdhb20Q91XZ9 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb20Q91XZ9 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb20Q91XZ9 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Pcdhb20Q91XZ9 Gm11478-201ENSMUST00000117851 599 ntBASIC13.15□□□□□ -0.3
Pcdhb20Q91XZ9 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb20Q91XZ9 Gm13184-201ENSMUST00000149932 626 ntTSL 3 BASIC13.15□□□□□ -0.3
Pcdhb20Q91XZ9 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC13.15□□□□□ -0.3
Pcdhb20Q91XZ9 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.15□□□□□ -0.3
Pcdhb20Q91XZ9 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.15□□□□□ -0.3
Pcdhb20Q91XZ9 Gm43803-202ENSMUST00000197765 580 ntTSL 3 BASIC13.15□□□□□ -0.3
Pcdhb20Q91XZ9 Gm33050-201ENSMUST00000198132 501 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb20Q91XZ9 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.15□□□□□ -0.3
Pcdhb20Q91XZ9 Gm18330-201ENSMUST00000199246 547 ntBASIC13.15□□□□□ -0.3
Pcdhb20Q91XZ9 1700047O18Rik-201ENSMUST00000209738 743 ntBASIC13.15□□□□□ -0.3
Pcdhb20Q91XZ9 Gm45384-201ENSMUST00000210451 277 ntBASIC13.15□□□□□ -0.3
Pcdhb20Q91XZ9 AC161426.1-201ENSMUST00000214137 286 ntBASIC13.15□□□□□ -0.3
Pcdhb20Q91XZ9 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.15□□□□□ -0.3
Pcdhb20Q91XZ9 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb20Q91XZ9 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.15□□□□□ -0.3
Pcdhb20Q91XZ9 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb20Q91XZ9 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb20Q91XZ9 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Pcdhb20Q91XZ9 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Pcdhb20Q91XZ9 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Pcdhb20Q91XZ9 Klri1-201ENSMUST00000088046 838 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb20Q91XZ9 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb20Q91XZ9 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Pcdhb20Q91XZ9 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb20Q91XZ9 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb20Q91XZ9 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb20Q91XZ9 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb20Q91XZ9 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb20Q91XZ9 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb20Q91XZ9 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb20Q91XZ9 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Pcdhb20Q91XZ9 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb20Q91XZ9 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb20Q91XZ9 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Pcdhb20Q91XZ9 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb20Q91XZ9 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Pcdhb20Q91XZ9 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb20Q91XZ9 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb20Q91XZ9 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Pcdhb20Q91XZ9 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Pcdhb20Q91XZ9 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
Pcdhb20Q91XZ9 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Pcdhb20Q91XZ9 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.14□□□□□ -0.31
Pcdhb20Q91XZ9 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb20Q91XZ9 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Pcdhb20Q91XZ9 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms