Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
Pcdhga3Q91XY5 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhga3Q91XY5 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhga3Q91XY5 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhga3Q91XY5 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhga3Q91XY5 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhga3Q91XY5 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhga3Q91XY5 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhga3Q91XY5 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Pcdhga3Q91XY5 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhga3Q91XY5 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhga3Q91XY5 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC11.75□□□□□ -0.53
Pcdhga3Q91XY5 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhga3Q91XY5 Gm9924-202ENSMUST00000192760 2311 ntBASIC11.75□□□□□ -0.53
Pcdhga3Q91XY5 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhga3Q91XY5 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhga3Q91XY5 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Pcdhga3Q91XY5 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhga3Q91XY5 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Pcdhga3Q91XY5 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhga3Q91XY5 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhga3Q91XY5 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Pcdhga3Q91XY5 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhga3Q91XY5 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Pcdhga3Q91XY5 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhga3Q91XY5 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Pcdhga3Q91XY5 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhga3Q91XY5 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhga3Q91XY5 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhga3Q91XY5 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhga3Q91XY5 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhga3Q91XY5 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhga3Q91XY5 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Pcdhga3Q91XY5 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhga3Q91XY5 Gm26464-201ENSMUST00000157094 305 ntBASIC11.74□□□□□ -0.53
Pcdhga3Q91XY5 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC11.74□□□□□ -0.53
Pcdhga3Q91XY5 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Pcdhga3Q91XY5 Gm28631-201ENSMUST00000190740 334 ntBASIC11.74□□□□□ -0.53
Pcdhga3Q91XY5 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC11.74□□□□□ -0.53
Pcdhga3Q91XY5 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC11.74□□□□□ -0.53
Pcdhga3Q91XY5 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhga3Q91XY5 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhga3Q91XY5 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhga3Q91XY5 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhga3Q91XY5 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Pcdhga3Q91XY5 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC11.74□□□□□ -0.53
Pcdhga3Q91XY5 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhga3Q91XY5 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhga3Q91XY5 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhga3Q91XY5 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhga3Q91XY5 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhga3Q91XY5 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhga3Q91XY5 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhga3Q91XY5 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhga3Q91XY5 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhga3Q91XY5 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhga3Q91XY5 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhga3Q91XY5 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhga3Q91XY5 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Pcdhga3Q91XY5 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhga3Q91XY5 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhga3Q91XY5 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhga3Q91XY5 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhga3Q91XY5 Gm7002-201ENSMUST00000221386 2165 ntBASIC11.74□□□□□ -0.53
Pcdhga3Q91XY5 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Pcdhga3Q91XY5 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC11.74□□□□□ -0.53
Pcdhga3Q91XY5 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhga3Q91XY5 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Pcdhga3Q91XY5 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.73□□□□□ -0.53
Pcdhga3Q91XY5 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhga3Q91XY5 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhga3Q91XY5 Gm7488-201ENSMUST00000117148 684 ntBASIC11.73□□□□□ -0.53
Pcdhga3Q91XY5 Ldha-ps-201ENSMUST00000119390 995 ntBASIC11.73□□□□□ -0.53
Pcdhga3Q91XY5 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhga3Q91XY5 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhga3Q91XY5 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.73□□□□□ -0.53
Pcdhga3Q91XY5 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC11.73□□□□□ -0.53
Pcdhga3Q91XY5 Gm38144-201ENSMUST00000192790 465 ntBASIC11.73□□□□□ -0.53
Pcdhga3Q91XY5 Gm37795-201ENSMUST00000194216 2459 ntBASIC11.73□□□□□ -0.53
Pcdhga3Q91XY5 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhga3Q91XY5 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhga3Q91XY5 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhga3Q91XY5 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhga3Q91XY5 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC11.73□□□□□ -0.53
Pcdhga3Q91XY5 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Pcdhga3Q91XY5 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC11.73□□□□□ -0.53
Pcdhga3Q91XY5 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Pcdhga3Q91XY5 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhga3Q91XY5 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhga3Q91XY5 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC11.73□□□□□ -0.53
Pcdhga3Q91XY5 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhga3Q91XY5 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhga3Q91XY5 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Pcdhga3Q91XY5 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Pcdhga3Q91XY5 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.73□□□□□ -0.53
Pcdhga3Q91XY5 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhga3Q91XY5 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhga3Q91XY5 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhga3Q91XY5 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhga3Q91XY5 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms