Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhga4Q91XY4 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhga4Q91XY4 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhga4Q91XY4 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhga4Q91XY4 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Pcdhga4Q91XY4 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhga4Q91XY4 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Pcdhga4Q91XY4 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.98□□□□□ -0.33
Pcdhga4Q91XY4 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhga4Q91XY4 Gm15824-201ENSMUST00000119516 955 ntBASIC12.98□□□□□ -0.33
Pcdhga4Q91XY4 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhga4Q91XY4 Gm7287-201ENSMUST00000205267 602 ntBASIC12.98□□□□□ -0.33
Pcdhga4Q91XY4 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Pcdhga4Q91XY4 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhga4Q91XY4 Gm18473-201ENSMUST00000220543 868 ntBASIC12.98□□□□□ -0.33
Pcdhga4Q91XY4 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhga4Q91XY4 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhga4Q91XY4 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhga4Q91XY4 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.98□□□□□ -0.33
Pcdhga4Q91XY4 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhga4Q91XY4 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhga4Q91XY4 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhga4Q91XY4 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhga4Q91XY4 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Pcdhga4Q91XY4 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.98□□□□□ -0.33
Pcdhga4Q91XY4 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Pcdhga4Q91XY4 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhga4Q91XY4 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.97□□□□□ -0.33
Pcdhga4Q91XY4 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Pcdhga4Q91XY4 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhga4Q91XY4 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhga4Q91XY4 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhga4Q91XY4 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Pcdhga4Q91XY4 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhga4Q91XY4 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhga4Q91XY4 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhga4Q91XY4 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhga4Q91XY4 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhga4Q91XY4 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhga4Q91XY4 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Pcdhga4Q91XY4 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Pcdhga4Q91XY4 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Pcdhga4Q91XY4 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhga4Q91XY4 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhga4Q91XY4 Gm4984-201ENSMUST00000115987 360 ntBASIC12.97□□□□□ -0.33
Pcdhga4Q91XY4 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.97□□□□□ -0.33
Pcdhga4Q91XY4 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Pcdhga4Q91XY4 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.97□□□□□ -0.33
Pcdhga4Q91XY4 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhga4Q91XY4 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Pcdhga4Q91XY4 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhga4Q91XY4 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.97□□□□□ -0.33
Pcdhga4Q91XY4 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.97□□□□□ -0.33
Pcdhga4Q91XY4 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.97□□□□□ -0.33
Pcdhga4Q91XY4 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhga4Q91XY4 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhga4Q91XY4 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhga4Q91XY4 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhga4Q91XY4 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhga4Q91XY4 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhga4Q91XY4 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Pcdhga4Q91XY4 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhga4Q91XY4 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhga4Q91XY4 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhga4Q91XY4 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.97□□□□□ -0.33
Pcdhga4Q91XY4 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Pcdhga4Q91XY4 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.97□□□□□ -0.33
Pcdhga4Q91XY4 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhga4Q91XY4 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhga4Q91XY4 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhga4Q91XY4 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Pcdhga4Q91XY4 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Pcdhga4Q91XY4 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhga4Q91XY4 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhga4Q91XY4 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhga4Q91XY4 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhga4Q91XY4 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.96□□□□□ -0.33
Pcdhga4Q91XY4 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.96□□□□□ -0.33
Pcdhga4Q91XY4 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhga4Q91XY4 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhga4Q91XY4 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Pcdhga4Q91XY4 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhga4Q91XY4 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhga4Q91XY4 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhga4Q91XY4 Gm11814-201ENSMUST00000119515 929 ntBASIC12.96□□□□□ -0.33
Pcdhga4Q91XY4 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.96□□□□□ -0.33
Pcdhga4Q91XY4 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.96□□□□□ -0.33
Pcdhga4Q91XY4 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhga4Q91XY4 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhga4Q91XY4 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.96□□□□□ -0.33
Pcdhga4Q91XY4 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.96□□□□□ -0.33
Pcdhga4Q91XY4 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.96□□□□□ -0.33
Pcdhga4Q91XY4 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhga4Q91XY4 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhga4Q91XY4 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdhga4Q91XY4 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdhga4Q91XY4 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.34
Pcdhga4Q91XY4 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdhga4Q91XY4 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.96□□□□□ -0.34
Pcdhga4Q91XY4 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms