Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vsx1Q91V10 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vsx1Q91V10 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vsx1Q91V10 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vsx1Q91V10 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vsx1Q91V10 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Vsx1Q91V10 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vsx1Q91V10 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Vsx1Q91V10 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vsx1Q91V10 Gm38346-201ENSMUST00000192379 2639 ntBASIC13□□□□□ -0.33
Vsx1Q91V10 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Vsx1Q91V10 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Vsx1Q91V10 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13□□□□□ -0.33
Vsx1Q91V10 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vsx1Q91V10 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vsx1Q91V10 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vsx1Q91V10 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vsx1Q91V10 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vsx1Q91V10 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vsx1Q91V10 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vsx1Q91V10 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vsx1Q91V10 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vsx1Q91V10 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vsx1Q91V10 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vsx1Q91V10 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vsx1Q91V10 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.99□□□□□ -0.33
Vsx1Q91V10 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vsx1Q91V10 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vsx1Q91V10 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vsx1Q91V10 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vsx1Q91V10 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Vsx1Q91V10 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Vsx1Q91V10 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vsx1Q91V10 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vsx1Q91V10 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.99□□□□□ -0.33
Vsx1Q91V10 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.99□□□□□ -0.33
Vsx1Q91V10 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vsx1Q91V10 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.99□□□□□ -0.33
Vsx1Q91V10 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.99□□□□□ -0.33
Vsx1Q91V10 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vsx1Q91V10 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vsx1Q91V10 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vsx1Q91V10 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vsx1Q91V10 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vsx1Q91V10 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vsx1Q91V10 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vsx1Q91V10 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vsx1Q91V10 Mmp14-206ENSMUST00000225641 3238 ntBASIC12.99□□□□□ -0.33
Vsx1Q91V10 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vsx1Q91V10 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vsx1Q91V10 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Vsx1Q91V10 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vsx1Q91V10 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.98□□□□□ -0.33
Vsx1Q91V10 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Vsx1Q91V10 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vsx1Q91V10 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vsx1Q91V10 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Vsx1Q91V10 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vsx1Q91V10 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vsx1Q91V10 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vsx1Q91V10 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.98□□□□□ -0.33
Vsx1Q91V10 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vsx1Q91V10 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vsx1Q91V10 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vsx1Q91V10 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vsx1Q91V10 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.98□□□□□ -0.33
Vsx1Q91V10 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vsx1Q91V10 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vsx1Q91V10 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vsx1Q91V10 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vsx1Q91V10 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vsx1Q91V10 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vsx1Q91V10 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vsx1Q91V10 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Vsx1Q91V10 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vsx1Q91V10 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vsx1Q91V10 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vsx1Q91V10 Gm12217-201ENSMUST00000118858 696 ntBASIC12.98□□□□□ -0.33
Vsx1Q91V10 Gm14726-201ENSMUST00000120623 896 ntBASIC12.98□□□□□ -0.33
Vsx1Q91V10 Gm14277-201ENSMUST00000121195 360 ntBASIC12.98□□□□□ -0.33
Vsx1Q91V10 Gm16479-201ENSMUST00000121706 932 ntBASIC12.98□□□□□ -0.33
Vsx1Q91V10 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vsx1Q91V10 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.98□□□□□ -0.33
Vsx1Q91V10 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.98□□□□□ -0.33
Vsx1Q91V10 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC12.98□□□□□ -0.33
Vsx1Q91V10 Gm18041-201ENSMUST00000218210 618 ntBASIC12.98□□□□□ -0.33
Vsx1Q91V10 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC12.98□□□□□ -0.33
Vsx1Q91V10 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vsx1Q91V10 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Vsx1Q91V10 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vsx1Q91V10 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vsx1Q91V10 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vsx1Q91V10 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vsx1Q91V10 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vsx1Q91V10 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vsx1Q91V10 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.98□□□□□ -0.33
Vsx1Q91V10 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Vsx1Q91V10 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vsx1Q91V10 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Vsx1Q91V10 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms