Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb11Q91UZ8 Gm11803-201ENSMUST00000119966 444 ntBASIC13.47□□□□□ -0.25
Pcdhb11Q91UZ8 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb11Q91UZ8 Gm24196-201ENSMUST00000179161 110 ntBASIC13.47□□□□□ -0.25
Pcdhb11Q91UZ8 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.47□□□□□ -0.25
Pcdhb11Q91UZ8 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.47□□□□□ -0.25
Pcdhb11Q91UZ8 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.47□□□□□ -0.25
Pcdhb11Q91UZ8 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.47□□□□□ -0.25
Pcdhb11Q91UZ8 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Pcdhb11Q91UZ8 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.47□□□□□ -0.25
Pcdhb11Q91UZ8 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb11Q91UZ8 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Pcdhb11Q91UZ8 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Pcdhb11Q91UZ8 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb11Q91UZ8 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Pcdhb11Q91UZ8 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.47□□□□□ -0.25
Pcdhb11Q91UZ8 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb11Q91UZ8 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb11Q91UZ8 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb11Q91UZ8 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb11Q91UZ8 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb11Q91UZ8 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb11Q91UZ8 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb11Q91UZ8 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.46□□□□□ -0.25
Pcdhb11Q91UZ8 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb11Q91UZ8 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb11Q91UZ8 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb11Q91UZ8 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Pcdhb11Q91UZ8 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Pcdhb11Q91UZ8 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Pcdhb11Q91UZ8 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb11Q91UZ8 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.46□□□□□ -0.25
Pcdhb11Q91UZ8 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb11Q91UZ8 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb11Q91UZ8 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb11Q91UZ8 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb11Q91UZ8 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb11Q91UZ8 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb11Q91UZ8 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC13.46□□□□□ -0.25
Pcdhb11Q91UZ8 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Pcdhb11Q91UZ8 Gm16202-201ENSMUST00000117532 544 ntBASIC13.46□□□□□ -0.25
Pcdhb11Q91UZ8 Mup-ps23-201ENSMUST00000118063 630 ntBASIC13.46□□□□□ -0.25
Pcdhb11Q91UZ8 Gm8213-201ENSMUST00000118191 441 ntBASIC13.46□□□□□ -0.25
Pcdhb11Q91UZ8 Gm11814-201ENSMUST00000119515 929 ntBASIC13.46□□□□□ -0.25
Pcdhb11Q91UZ8 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb11Q91UZ8 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.46□□□□□ -0.25
Pcdhb11Q91UZ8 Gm43371-201ENSMUST00000202838 1031 ntBASIC13.46□□□□□ -0.25
Pcdhb11Q91UZ8 Gm18041-201ENSMUST00000218210 618 ntBASIC13.46□□□□□ -0.25
Pcdhb11Q91UZ8 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.46□□□□□ -0.25
Pcdhb11Q91UZ8 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb11Q91UZ8 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb11Q91UZ8 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb11Q91UZ8 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdhb11Q91UZ8 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdhb11Q91UZ8 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdhb11Q91UZ8 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.46□□□□□ -0.26
Pcdhb11Q91UZ8 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.46□□□□□ -0.26
Pcdhb11Q91UZ8 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdhb11Q91UZ8 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.46□□□□□ -0.26
Pcdhb11Q91UZ8 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdhb11Q91UZ8 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdhb11Q91UZ8 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdhb11Q91UZ8 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb11Q91UZ8 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.45□□□□□ -0.26
Pcdhb11Q91UZ8 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.45□□□□□ -0.26
Pcdhb11Q91UZ8 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.45□□□□□ -0.26
Pcdhb11Q91UZ8 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb11Q91UZ8 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb11Q91UZ8 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb11Q91UZ8 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb11Q91UZ8 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb11Q91UZ8 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb11Q91UZ8 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb11Q91UZ8 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.45□□□□□ -0.26
Pcdhb11Q91UZ8 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb11Q91UZ8 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Pcdhb11Q91UZ8 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb11Q91UZ8 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Pcdhb11Q91UZ8 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Pcdhb11Q91UZ8 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb11Q91UZ8 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb11Q91UZ8 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb11Q91UZ8 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Pcdhb11Q91UZ8 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC13.45□□□□□ -0.26
Pcdhb11Q91UZ8 Gm8810-201ENSMUST00000172895 754 ntBASIC13.45□□□□□ -0.26
Pcdhb11Q91UZ8 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.45□□□□□ -0.26
Pcdhb11Q91UZ8 Gm5745-201ENSMUST00000183748 313 ntBASIC13.45□□□□□ -0.26
Pcdhb11Q91UZ8 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb11Q91UZ8 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC13.45□□□□□ -0.26
Pcdhb11Q91UZ8 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13.45□□□□□ -0.26
Pcdhb11Q91UZ8 Gm16372-201ENSMUST00000073088 450 ntBASIC13.45□□□□□ -0.26
Pcdhb11Q91UZ8 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Pcdhb11Q91UZ8 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb11Q91UZ8 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb11Q91UZ8 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb11Q91UZ8 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Pcdhb11Q91UZ8 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb11Q91UZ8 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb11Q91UZ8 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.45□□□□□ -0.26
Pcdhb11Q91UZ8 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms