Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim60Q8VI40 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim60Q8VI40 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim60Q8VI40 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim60Q8VI40 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim60Q8VI40 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim60Q8VI40 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim60Q8VI40 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim60Q8VI40 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim60Q8VI40 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim60Q8VI40 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim60Q8VI40 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim60Q8VI40 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim60Q8VI40 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim60Q8VI40 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim60Q8VI40 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim60Q8VI40 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim60Q8VI40 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim60Q8VI40 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.61□□□□□ -0.23
Trim60Q8VI40 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim60Q8VI40 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC13.61□□□□□ -0.23
Trim60Q8VI40 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.61□□□□□ -0.23
Trim60Q8VI40 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC13.61□□□□□ -0.23
Trim60Q8VI40 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC13.61□□□□□ -0.23
Trim60Q8VI40 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.61□□□□□ -0.23
Trim60Q8VI40 AC138604.1-201ENSMUST00000226969 739 ntBASIC13.61□□□□□ -0.23
Trim60Q8VI40 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.61□□□□□ -0.23
Trim60Q8VI40 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim60Q8VI40 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC13.61□□□□□ -0.23
Trim60Q8VI40 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim60Q8VI40 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.61□□□□□ -0.23
Trim60Q8VI40 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.61□□□□□ -0.23
Trim60Q8VI40 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.61□□□□□ -0.23
Trim60Q8VI40 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim60Q8VI40 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim60Q8VI40 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim60Q8VI40 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim60Q8VI40 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim60Q8VI40 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim60Q8VI40 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Trim60Q8VI40 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim60Q8VI40 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trim60Q8VI40 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.6□□□□□ -0.23
Trim60Q8VI40 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.6□□□□□ -0.23
Trim60Q8VI40 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Trim60Q8VI40 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim60Q8VI40 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim60Q8VI40 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim60Q8VI40 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim60Q8VI40 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Trim60Q8VI40 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
Trim60Q8VI40 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Trim60Q8VI40 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Trim60Q8VI40 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.6□□□□□ -0.23
Trim60Q8VI40 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Trim60Q8VI40 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.6□□□□□ -0.23
Trim60Q8VI40 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.6□□□□□ -0.23
Trim60Q8VI40 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.6□□□□□ -0.23
Trim60Q8VI40 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.6□□□□□ -0.23
Trim60Q8VI40 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13.6□□□□□ -0.23
Trim60Q8VI40 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trim60Q8VI40 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Trim60Q8VI40 Gm27838-201ENSMUST00000184829 128 ntBASIC13.6□□□□□ -0.23
Trim60Q8VI40 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.6□□□□□ -0.23
Trim60Q8VI40 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.6□□□□□ -0.23
Trim60Q8VI40 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim60Q8VI40 Gm9797-201ENSMUST00000052902 613 ntBASIC13.6□□□□□ -0.23
Trim60Q8VI40 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim60Q8VI40 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trim60Q8VI40 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim60Q8VI40 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim60Q8VI40 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim60Q8VI40 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim60Q8VI40 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim60Q8VI40 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim60Q8VI40 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim60Q8VI40 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.6□□□□□ -0.23
Trim60Q8VI40 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim60Q8VI40 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim60Q8VI40 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Trim60Q8VI40 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim60Q8VI40 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim60Q8VI40 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim60Q8VI40 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim60Q8VI40 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim60Q8VI40 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.59□□□□□ -0.23
Trim60Q8VI40 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trim60Q8VI40 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim60Q8VI40 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim60Q8VI40 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trim60Q8VI40 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.59□□□□□ -0.23
Trim60Q8VI40 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim60Q8VI40 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim60Q8VI40 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trim60Q8VI40 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim60Q8VI40 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Trim60Q8VI40 Mir7684-201ENSMUST00000183858 60 ntBASIC13.59□□□□□ -0.23
Trim60Q8VI40 Gm7063-201ENSMUST00000186840 981 ntBASIC13.59□□□□□ -0.23
Trim60Q8VI40 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.59□□□□□ -0.23
Trim60Q8VI40 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms