Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.48
Nkd2Q8VE28 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Nkd2Q8VE28 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.02□□□□□ -0.48
Nkd2Q8VE28 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nkd2Q8VE28 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Nkd2Q8VE28 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nkd2Q8VE28 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Nkd2Q8VE28 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.02□□□□□ -0.49
Nkd2Q8VE28 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkd2Q8VE28 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nkd2Q8VE28 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nkd2Q8VE28 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.02□□□□□ -0.49
Nkd2Q8VE28 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkd2Q8VE28 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Nkd2Q8VE28 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC12.02□□□□□ -0.49
Nkd2Q8VE28 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.02□□□□□ -0.49
Nkd2Q8VE28 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkd2Q8VE28 Gm12928-201ENSMUST00000117115 573 ntBASIC12.02□□□□□ -0.49
Nkd2Q8VE28 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.02□□□□□ -0.49
Nkd2Q8VE28 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nkd2Q8VE28 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Nkd2Q8VE28 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nkd2Q8VE28 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nkd2Q8VE28 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkd2Q8VE28 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkd2Q8VE28 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkd2Q8VE28 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nkd2Q8VE28 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nkd2Q8VE28 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkd2Q8VE28 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nkd2Q8VE28 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkd2Q8VE28 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkd2Q8VE28 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
Nkd2Q8VE28 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.02□□□□□ -0.49
Nkd2Q8VE28 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkd2Q8VE28 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Nkd2Q8VE28 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkd2Q8VE28 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nkd2Q8VE28 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Nkd2Q8VE28 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkd2Q8VE28 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkd2Q8VE28 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.01□□□□□ -0.49
Nkd2Q8VE28 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nkd2Q8VE28 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nkd2Q8VE28 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkd2Q8VE28 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkd2Q8VE28 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.01□□□□□ -0.49
Nkd2Q8VE28 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.01□□□□□ -0.49
Nkd2Q8VE28 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkd2Q8VE28 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Nkd2Q8VE28 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkd2Q8VE28 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.01□□□□□ -0.49
Nkd2Q8VE28 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkd2Q8VE28 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkd2Q8VE28 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nkd2Q8VE28 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkd2Q8VE28 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Nkd2Q8VE28 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkd2Q8VE28 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nkd2Q8VE28 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nkd2Q8VE28 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Nkd2Q8VE28 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nkd2Q8VE28 Gm27847-201ENSMUST00000183711 107 ntBASIC12.01□□□□□ -0.49
Nkd2Q8VE28 Gm27375-201ENSMUST00000183799 107 ntBASIC12.01□□□□□ -0.49
Nkd2Q8VE28 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.01□□□□□ -0.49
Nkd2Q8VE28 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.01□□□□□ -0.49
Nkd2Q8VE28 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nkd2Q8VE28 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Nkd2Q8VE28 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Nkd2Q8VE28 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkd2Q8VE28 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Nkd2Q8VE28 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkd2Q8VE28 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nkd2Q8VE28 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkd2Q8VE28 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkd2Q8VE28 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkd2Q8VE28 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkd2Q8VE28 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nkd2Q8VE28 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12□□□□□ -0.49
Nkd2Q8VE28 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nkd2Q8VE28 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkd2Q8VE28 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkd2Q8VE28 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nkd2Q8VE28 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkd2Q8VE28 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkd2Q8VE28 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Nkd2Q8VE28 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nkd2Q8VE28 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkd2Q8VE28 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC12□□□□□ -0.49
Nkd2Q8VE28 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nkd2Q8VE28 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Nkd2Q8VE28 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Nkd2Q8VE28 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkd2Q8VE28 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Nkd2Q8VE28 Gm3809-201ENSMUST00000180973 1006 ntBASIC12□□□□□ -0.49
Nkd2Q8VE28 Mir6420-201ENSMUST00000185032 102 ntBASIC12□□□□□ -0.49
Nkd2Q8VE28 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12□□□□□ -0.49
Nkd2Q8VE28 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkd2Q8VE28 Gm45331-201ENSMUST00000209868 554 ntBASIC12□□□□□ -0.49
Nkd2Q8VE28 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms