Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm1Q8VC85 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm1Q8VC85 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm1Q8VC85 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.63□□□□□ -0.39
Lsm1Q8VC85 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm1Q8VC85 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm1Q8VC85 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm1Q8VC85 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm1Q8VC85 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm1Q8VC85 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm1Q8VC85 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm1Q8VC85 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm1Q8VC85 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm1Q8VC85 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Lsm1Q8VC85 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Lsm1Q8VC85 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm1Q8VC85 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm1Q8VC85 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm1Q8VC85 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm1Q8VC85 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm1Q8VC85 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm1Q8VC85 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm1Q8VC85 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm1Q8VC85 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm1Q8VC85 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm1Q8VC85 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm1Q8VC85 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC12.62□□□□□ -0.39
Lsm1Q8VC85 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.62□□□□□ -0.39
Lsm1Q8VC85 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm1Q8VC85 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.62□□□□□ -0.39
Lsm1Q8VC85 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.62□□□□□ -0.39
Lsm1Q8VC85 Gm42612-201ENSMUST00000197986 623 ntBASIC12.62□□□□□ -0.39
Lsm1Q8VC85 Gm43170-201ENSMUST00000199827 612 ntBASIC12.62□□□□□ -0.39
Lsm1Q8VC85 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Lsm1Q8VC85 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm1Q8VC85 Gm7730-201ENSMUST00000212486 454 ntBASIC12.62□□□□□ -0.39
Lsm1Q8VC85 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Lsm1Q8VC85 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.62□□□□□ -0.39
Lsm1Q8VC85 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Lsm1Q8VC85 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Lsm1Q8VC85 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm1Q8VC85 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm1Q8VC85 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm1Q8VC85 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.62□□□□□ -0.39
Lsm1Q8VC85 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.62□□□□□ -0.39
Lsm1Q8VC85 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.62□□□□□ -0.39
Lsm1Q8VC85 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm1Q8VC85 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.62□□□□□ -0.39
Lsm1Q8VC85 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Lsm1Q8VC85 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm1Q8VC85 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.62□□□□□ -0.39
Lsm1Q8VC85 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm1Q8VC85 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.61□□□□□ -0.39
Lsm1Q8VC85 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Lsm1Q8VC85 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Lsm1Q8VC85 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm1Q8VC85 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.61□□□□□ -0.39
Lsm1Q8VC85 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.61□□□□□ -0.39
Lsm1Q8VC85 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm1Q8VC85 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm1Q8VC85 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm1Q8VC85 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm1Q8VC85 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm1Q8VC85 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.61□□□□□ -0.39
Lsm1Q8VC85 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm1Q8VC85 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm1Q8VC85 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm1Q8VC85 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.61□□□□□ -0.39
Lsm1Q8VC85 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
Lsm1Q8VC85 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.61□□□□□ -0.39
Lsm1Q8VC85 Gm38223-201ENSMUST00000194484 695 ntBASIC12.61□□□□□ -0.39
Lsm1Q8VC85 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm1Q8VC85 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.61□□□□□ -0.39
Lsm1Q8VC85 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.61□□□□□ -0.39
Lsm1Q8VC85 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm1Q8VC85 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm1Q8VC85 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Lsm1Q8VC85 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm1Q8VC85 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Lsm1Q8VC85 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm1Q8VC85 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Lsm1Q8VC85 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm1Q8VC85 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Lsm1Q8VC85 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm1Q8VC85 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm1Q8VC85 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm1Q8VC85 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm1Q8VC85 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm1Q8VC85 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm1Q8VC85 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm1Q8VC85 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
Lsm1Q8VC85 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm1Q8VC85 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm1Q8VC85 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm1Q8VC85 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm1Q8VC85 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.6□□□□□ -0.39
Lsm1Q8VC85 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.6□□□□□ -0.39
Lsm1Q8VC85 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm1Q8VC85 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm1Q8VC85 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms