Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpap2Q8VC34 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpap2Q8VC34 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpap2Q8VC34 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC14.42□□□□□ -0.1
Rpap2Q8VC34 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC14.42□□□□□ -0.1
Rpap2Q8VC34 AC140375.2-201ENSMUST00000225283 584 ntBASIC14.42□□□□□ -0.1
Rpap2Q8VC34 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpap2Q8VC34 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpap2Q8VC34 AC101945.2-201ENSMUST00000227886 1377 ntBASIC14.42□□□□□ -0.1
Rpap2Q8VC34 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpap2Q8VC34 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpap2Q8VC34 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Rpap2Q8VC34 Gm45684-201ENSMUST00000210244 1571 ntBASIC14.42□□□□□ -0.1
Rpap2Q8VC34 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpap2Q8VC34 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpap2Q8VC34 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpap2Q8VC34 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpap2Q8VC34 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpap2Q8VC34 Gm37644-201ENSMUST00000192190 2270 ntBASIC14.41□□□□□ -0.1
Rpap2Q8VC34 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC14.41□□□□□ -0.1
Rpap2Q8VC34 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpap2Q8VC34 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpap2Q8VC34 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpap2Q8VC34 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpap2Q8VC34 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpap2Q8VC34 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Rpap2Q8VC34 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpap2Q8VC34 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Rpap2Q8VC34 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpap2Q8VC34 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpap2Q8VC34 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC14.41□□□□□ -0.1
Rpap2Q8VC34 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rpap2Q8VC34 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC14.41□□□□□ -0.1
Rpap2Q8VC34 Gm11424-201ENSMUST00000121929 829 ntBASIC14.41□□□□□ -0.1
Rpap2Q8VC34 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpap2Q8VC34 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC14.41□□□□□ -0.1
Rpap2Q8VC34 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rpap2Q8VC34 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC14.41□□□□□ -0.1
Rpap2Q8VC34 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpap2Q8VC34 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rpap2Q8VC34 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rpap2Q8VC34 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rpap2Q8VC34 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpap2Q8VC34 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpap2Q8VC34 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpap2Q8VC34 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpap2Q8VC34 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpap2Q8VC34 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpap2Q8VC34 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpap2Q8VC34 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpap2Q8VC34 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpap2Q8VC34 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rpap2Q8VC34 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpap2Q8VC34 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpap2Q8VC34 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Rpap2Q8VC34 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpap2Q8VC34 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpap2Q8VC34 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpap2Q8VC34 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpap2Q8VC34 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC14.4□□□□□ -0.1
Rpap2Q8VC34 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpap2Q8VC34 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Rpap2Q8VC34 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpap2Q8VC34 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpap2Q8VC34 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Rpap2Q8VC34 Gm45643-201ENSMUST00000211364 1484 ntBASIC14.4□□□□□ -0.1
Rpap2Q8VC34 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpap2Q8VC34 Gm38049-201ENSMUST00000195698 1372 ntBASIC14.4□□□□□ -0.1
Rpap2Q8VC34 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpap2Q8VC34 Mir686-201ENSMUST00000102174 109 ntBASIC14.4□□□□□ -0.1
Rpap2Q8VC34 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC14.4□□□□□ -0.1
Rpap2Q8VC34 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Rpap2Q8VC34 Gm28693-202ENSMUST00000190758 331 ntBASIC14.4□□□□□ -0.1
Rpap2Q8VC34 Gm37922-201ENSMUST00000195596 455 ntBASIC14.4□□□□□ -0.1
Rpap2Q8VC34 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC14.4□□□□□ -0.1
Rpap2Q8VC34 Gm6458-201ENSMUST00000211573 635 ntBASIC14.4□□□□□ -0.1
Rpap2Q8VC34 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpap2Q8VC34 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpap2Q8VC34 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpap2Q8VC34 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpap2Q8VC34 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpap2Q8VC34 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rpap2Q8VC34 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpap2Q8VC34 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Rpap2Q8VC34 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC14.4□□□□□ -0.1
Rpap2Q8VC34 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Rpap2Q8VC34 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpap2Q8VC34 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC14.4□□□□□ -0.1
Rpap2Q8VC34 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpap2Q8VC34 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpap2Q8VC34 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpap2Q8VC34 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpap2Q8VC34 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC14.39□□□□□ -0.11
Rpap2Q8VC34 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpap2Q8VC34 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpap2Q8VC34 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rpap2Q8VC34 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rpap2Q8VC34 AC151895.1-201ENSMUST00000219025 1742 ntBASIC14.39□□□□□ -0.11
Rpap2Q8VC34 Gm15222-202ENSMUST00000228667 1726 ntBASIC14.39□□□□□ -0.11
Rpap2Q8VC34 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms