Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps39Q8R5L3 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vps39Q8R5L3 Gm29608-201ENSMUST00000190444 463 ntBASIC13.19□□□□□ -0.3
Vps39Q8R5L3 Gm20949-201ENSMUST00000206478 952 ntBASIC13.19□□□□□ -0.3
Vps39Q8R5L3 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC13.19□□□□□ -0.3
Vps39Q8R5L3 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps39Q8R5L3 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
Vps39Q8R5L3 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Vps39Q8R5L3 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Vps39Q8R5L3 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Vps39Q8R5L3 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps39Q8R5L3 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps39Q8R5L3 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vps39Q8R5L3 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.19□□□□□ -0.3
Vps39Q8R5L3 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps39Q8R5L3 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vps39Q8R5L3 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps39Q8R5L3 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vps39Q8R5L3 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps39Q8R5L3 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps39Q8R5L3 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
Vps39Q8R5L3 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Vps39Q8R5L3 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Vps39Q8R5L3 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps39Q8R5L3 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.18□□□□□ -0.3
Vps39Q8R5L3 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps39Q8R5L3 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps39Q8R5L3 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps39Q8R5L3 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps39Q8R5L3 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps39Q8R5L3 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps39Q8R5L3 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.18□□□□□ -0.3
Vps39Q8R5L3 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vps39Q8R5L3 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps39Q8R5L3 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC13.18□□□□□ -0.3
Vps39Q8R5L3 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.18□□□□□ -0.3
Vps39Q8R5L3 Gm42612-201ENSMUST00000197986 623 ntBASIC13.18□□□□□ -0.3
Vps39Q8R5L3 Gm43170-201ENSMUST00000199827 612 ntBASIC13.18□□□□□ -0.3
Vps39Q8R5L3 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vps39Q8R5L3 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Vps39Q8R5L3 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps39Q8R5L3 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vps39Q8R5L3 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps39Q8R5L3 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.18□□□□□ -0.3
Vps39Q8R5L3 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps39Q8R5L3 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps39Q8R5L3 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Vps39Q8R5L3 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps39Q8R5L3 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps39Q8R5L3 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps39Q8R5L3 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps39Q8R5L3 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps39Q8R5L3 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Vps39Q8R5L3 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps39Q8R5L3 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.18□□□□□ -0.3
Vps39Q8R5L3 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vps39Q8R5L3 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Vps39Q8R5L3 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.17□□□□□ -0.3
Vps39Q8R5L3 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC13.17□□□□□ -0.3
Vps39Q8R5L3 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Vps39Q8R5L3 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vps39Q8R5L3 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Vps39Q8R5L3 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vps39Q8R5L3 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps39Q8R5L3 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Vps39Q8R5L3 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Vps39Q8R5L3 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps39Q8R5L3 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps39Q8R5L3 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps39Q8R5L3 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps39Q8R5L3 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.17□□□□□ -0.3
Vps39Q8R5L3 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.17□□□□□ -0.3
Vps39Q8R5L3 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps39Q8R5L3 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vps39Q8R5L3 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps39Q8R5L3 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.17□□□□□ -0.3
Vps39Q8R5L3 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.17□□□□□ -0.3
Vps39Q8R5L3 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.17□□□□□ -0.3
Vps39Q8R5L3 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.17□□□□□ -0.3
Vps39Q8R5L3 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vps39Q8R5L3 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vps39Q8R5L3 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Vps39Q8R5L3 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps39Q8R5L3 Gm7730-201ENSMUST00000212486 454 ntBASIC13.17□□□□□ -0.3
Vps39Q8R5L3 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.17□□□□□ -0.3
Vps39Q8R5L3 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps39Q8R5L3 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.17□□□□□ -0.3
Vps39Q8R5L3 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.17□□□□□ -0.3
Vps39Q8R5L3 Gm26315-201ENSMUST00000083890 321 ntBASIC13.17□□□□□ -0.3
Vps39Q8R5L3 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps39Q8R5L3 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps39Q8R5L3 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps39Q8R5L3 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps39Q8R5L3 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.17□□□□□ -0.3
Vps39Q8R5L3 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps39Q8R5L3 Gm37324-201ENSMUST00000194500 4504 ntBASIC13.17□□□□□ -0.3
Vps39Q8R5L3 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vps39Q8R5L3 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps39Q8R5L3 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps39Q8R5L3 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms