Protein–RNA interactions for Protein: Q8R326

Pspc1, Paraspeckle component 1, mousemouse

Known RBP Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pspc1Q8R326 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pspc1Q8R326 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pspc1Q8R326 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pspc1Q8R326 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pspc1Q8R326 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pspc1Q8R326 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pspc1Q8R326 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pspc1Q8R326 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pspc1Q8R326 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pspc1Q8R326 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC15.11■□□□□ 0.01
Pspc1Q8R326 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pspc1Q8R326 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC15.11■□□□□ 0.01
Pspc1Q8R326 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pspc1Q8R326 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC15.1■□□□□ 0.01
Pspc1Q8R326 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pspc1Q8R326 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pspc1Q8R326 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pspc1Q8R326 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pspc1Q8R326 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pspc1Q8R326 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
Pspc1Q8R326 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pspc1Q8R326 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pspc1Q8R326 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC15.1■□□□□ 0.01
Pspc1Q8R326 Gm43822-201ENSMUST00000200285 476 ntBASIC15.1■□□□□ 0.01
Pspc1Q8R326 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC15.1■□□□□ 0.01
Pspc1Q8R326 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC15.1■□□□□ 0.01
Pspc1Q8R326 Gm9257-201ENSMUST00000221254 232 ntBASIC15.1■□□□□ 0.01
Pspc1Q8R326 AC022775.2-201ENSMUST00000227885 646 ntBASIC15.1■□□□□ 0.01
Pspc1Q8R326 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pspc1Q8R326 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pspc1Q8R326 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pspc1Q8R326 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pspc1Q8R326 AC153366.2-201ENSMUST00000219461 1984 ntBASIC15.1■□□□□ 0.01
Pspc1Q8R326 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pspc1Q8R326 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Pspc1Q8R326 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pspc1Q8R326 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pspc1Q8R326 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
Pspc1Q8R326 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pspc1Q8R326 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pspc1Q8R326 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Pspc1Q8R326 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pspc1Q8R326 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC15.1■□□□□ 0.01
Pspc1Q8R326 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pspc1Q8R326 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pspc1Q8R326 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pspc1Q8R326 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Pspc1Q8R326 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pspc1Q8R326 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pspc1Q8R326 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Pspc1Q8R326 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Pspc1Q8R326 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Pspc1Q8R326 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pspc1Q8R326 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pspc1Q8R326 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC15.09■□□□□ 0.01
Pspc1Q8R326 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pspc1Q8R326 Gm11978-201ENSMUST00000122315 466 ntBASIC15.09■□□□□ 0.01
Pspc1Q8R326 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pspc1Q8R326 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pspc1Q8R326 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC15.09■□□□□ 0.01
Pspc1Q8R326 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC15.09■□□□□ 0.01
Pspc1Q8R326 Olfr284-202ENSMUST00000206647 966 ntBASIC15.09■□□□□ 0.01
Pspc1Q8R326 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pspc1Q8R326 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC15.09■□□□□ 0.01
Pspc1Q8R326 AC135669.1-202ENSMUST00000216742 540 ntBASIC15.09■□□□□ 0.01
Pspc1Q8R326 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC15.09■□□□□ 0.01
Pspc1Q8R326 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC15.09■□□□□ 0.01
Pspc1Q8R326 Rassf8-202ENSMUST00000058538 1131 ntBASIC15.09■□□□□ 0.01
Pspc1Q8R326 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC15.09■□□□□ 0.01
Pspc1Q8R326 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pspc1Q8R326 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Pspc1Q8R326 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pspc1Q8R326 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pspc1Q8R326 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pspc1Q8R326 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pspc1Q8R326 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pspc1Q8R326 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC15.09■□□□□ 0.01
Pspc1Q8R326 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pspc1Q8R326 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pspc1Q8R326 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pspc1Q8R326 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pspc1Q8R326 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Pspc1Q8R326 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pspc1Q8R326 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pspc1Q8R326 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC15.08■□□□□ 0.01
Pspc1Q8R326 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pspc1Q8R326 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pspc1Q8R326 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pspc1Q8R326 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pspc1Q8R326 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Pspc1Q8R326 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pspc1Q8R326 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Pspc1Q8R326 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC15.08■□□□□ 0
Pspc1Q8R326 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC15.08■□□□□ 0
Pspc1Q8R326 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pspc1Q8R326 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pspc1Q8R326 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC15.08■□□□□ 0
Pspc1Q8R326 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pspc1Q8R326 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Pspc1Q8R326 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms