Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Sf3a1Q8K4Z5 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sf3a1Q8K4Z5 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sf3a1Q8K4Z5 Gm13050-201ENSMUST00000122149 1345 ntBASIC16.1■□□□□ 0.17
Sf3a1Q8K4Z5 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC16.1■□□□□ 0.17
Sf3a1Q8K4Z5 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sf3a1Q8K4Z5 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Sf3a1Q8K4Z5 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sf3a1Q8K4Z5 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sf3a1Q8K4Z5 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC16.09■□□□□ 0.17
Sf3a1Q8K4Z5 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sf3a1Q8K4Z5 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sf3a1Q8K4Z5 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sf3a1Q8K4Z5 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sf3a1Q8K4Z5 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Sf3a1Q8K4Z5 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sf3a1Q8K4Z5 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sf3a1Q8K4Z5 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sf3a1Q8K4Z5 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sf3a1Q8K4Z5 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Sf3a1Q8K4Z5 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Sf3a1Q8K4Z5 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC16.09■□□□□ 0.17
Sf3a1Q8K4Z5 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sf3a1Q8K4Z5 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sf3a1Q8K4Z5 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sf3a1Q8K4Z5 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Sf3a1Q8K4Z5 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Sf3a1Q8K4Z5 Gm27847-201ENSMUST00000183711 107 ntBASIC16.09■□□□□ 0.17
Sf3a1Q8K4Z5 Gm27375-201ENSMUST00000183799 107 ntBASIC16.09■□□□□ 0.17
Sf3a1Q8K4Z5 Gm37748-201ENSMUST00000194379 1140 ntBASIC16.09■□□□□ 0.17
Sf3a1Q8K4Z5 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC16.09■□□□□ 0.17
Sf3a1Q8K4Z5 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC16.09■□□□□ 0.17
Sf3a1Q8K4Z5 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sf3a1Q8K4Z5 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
Sf3a1Q8K4Z5 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sf3a1Q8K4Z5 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Sf3a1Q8K4Z5 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sf3a1Q8K4Z5 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sf3a1Q8K4Z5 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC16.09■□□□□ 0.17
Sf3a1Q8K4Z5 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sf3a1Q8K4Z5 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sf3a1Q8K4Z5 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Sf3a1Q8K4Z5 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Sf3a1Q8K4Z5 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC16.09■□□□□ 0.17
Sf3a1Q8K4Z5 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Sf3a1Q8K4Z5 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Sf3a1Q8K4Z5 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Sf3a1Q8K4Z5 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
Sf3a1Q8K4Z5 Gm37795-201ENSMUST00000194216 2459 ntBASIC16.08■□□□□ 0.17
Sf3a1Q8K4Z5 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Sf3a1Q8K4Z5 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Sf3a1Q8K4Z5 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Sf3a1Q8K4Z5 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Sf3a1Q8K4Z5 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Sf3a1Q8K4Z5 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC16.08■□□□□ 0.16
Sf3a1Q8K4Z5 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sf3a1Q8K4Z5 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Sf3a1Q8K4Z5 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Sf3a1Q8K4Z5 AC155237.1-201ENSMUST00000226196 1279 ntBASIC16.08■□□□□ 0.16
Sf3a1Q8K4Z5 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sf3a1Q8K4Z5 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sf3a1Q8K4Z5 Gm6091-201ENSMUST00000098307 165 ntBASIC16.08■□□□□ 0.16
Sf3a1Q8K4Z5 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
Sf3a1Q8K4Z5 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sf3a1Q8K4Z5 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC16.08■□□□□ 0.16
Sf3a1Q8K4Z5 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Sf3a1Q8K4Z5 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC16.08■□□□□ 0.16
Sf3a1Q8K4Z5 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC16.08■□□□□ 0.16
Sf3a1Q8K4Z5 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Sf3a1Q8K4Z5 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sf3a1Q8K4Z5 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sf3a1Q8K4Z5 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sf3a1Q8K4Z5 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Sf3a1Q8K4Z5 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sf3a1Q8K4Z5 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sf3a1Q8K4Z5 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sf3a1Q8K4Z5 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Sf3a1Q8K4Z5 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sf3a1Q8K4Z5 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Sf3a1Q8K4Z5 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sf3a1Q8K4Z5 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Sf3a1Q8K4Z5 Gm11618-201ENSMUST00000117946 267 ntBASIC16.07■□□□□ 0.16
Sf3a1Q8K4Z5 Gm11978-201ENSMUST00000122315 466 ntBASIC16.07■□□□□ 0.16
Sf3a1Q8K4Z5 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sf3a1Q8K4Z5 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sf3a1Q8K4Z5 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Sf3a1Q8K4Z5 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC16.07■□□□□ 0.16
Sf3a1Q8K4Z5 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sf3a1Q8K4Z5 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC16.07■□□□□ 0.16
Sf3a1Q8K4Z5 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sf3a1Q8K4Z5 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sf3a1Q8K4Z5 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC16.07■□□□□ 0.16
Sf3a1Q8K4Z5 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sf3a1Q8K4Z5 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC16.07■□□□□ 0.16
Sf3a1Q8K4Z5 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Sf3a1Q8K4Z5 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sf3a1Q8K4Z5 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sf3a1Q8K4Z5 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sf3a1Q8K4Z5 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sf3a1Q8K4Z5 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms